| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is idnK [H]
Identifier: 153947375
GI number: 153947375
Start: 1710845
End: 1711381
Strand: Reverse
Name: idnK [H]
Synonym: YpsIP31758_1469
Alternate gene names: 153947375
Gene position: 1711381-1710845 (Counterclockwise)
Preceding gene: 153946945
Following gene: 153947754
Centisome position: 36.23
GC content: 51.02
Gene sequence:
>537_bases ATGTCTGGTAAATGCATTATTGTCATGGGTGTCTCTGGTACCGGTAAATCCTGTGTCGGTCAGGCGCTGGCATTGGCCCT TGGCGCTAAATTTATTGATGGCGACGATCTACACCCACGGGCCAATATCCAAAAAATGGCCGCCGGCCAGCCACTGAACG ATCAAGATCGTGCACCCTGGCTTGAGCGATTAAGTGATGTGGCGTATAGCCTGCAACAAAAAAACGAAGTGGGTTTTCTG GTGTGTTCAGCACTGAAAAAACAGTATCGAGACCGCCTGCGTGAAGGTAATGAAGGGATACGTTTTCTCTGGCTGACCGG TGGTTACAATTTAGTGCTACACCGGATGCAGCAGCGGGCCGGGCATTTTATGCCAGAGAGCCTGCTCCAGAGCCAGTTCG CCACGTTGGAAGCGCCGGGGAGCAATGAACCGGATGTGATTCCCATCGATATTTCATCTTCCATTGCCGATGTTGTTGAA CACTGTATTGCCGCATTGTCACAGGAAAACCACGTGCGCGCGATTCTTAGTGAATAG
Upstream 100 bases:
>100_bases TGTTAATGGTCATTTGCTGTTTGTTGATGGTGGCATGCTGGTAGCCGTTTAATCCAGGGTTCAGTCGTACTCCCCACATA ATGGGGAGCAGAGGAAAATT
Downstream 100 bases:
>100_bases CGGTGCTGAATGAATAGCGTTTTTTATTGAATGACGGTGCTTAACTGCGCGGACCCCATAAGGGGATAGGAAAAATAATG ATACTTGATGAACTAAAAAA
Product: thermosensitive gluconokinase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPWLERLSDVAYSLQQKNEVGFL VCSALKKQYRDRLREGNEGIRFLWLTGGYNLVLHRMQQRAGHFMPESLLQSQFATLEAPGSNEPDVIPIDISSSIADVVE HCIAALSQENHVRAILSE
Sequences:
>Translated_178_residues MSGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPWLERLSDVAYSLQQKNEVGFL VCSALKKQYRDRLREGNEGIRFLWLTGGYNLVLHRMQQRAGHFMPESLLQSQFATLEAPGSNEPDVIPIDISSSIADVVE HCIAALSQENHVRAILSE >Mature_177_residues SGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPWLERLSDVAYSLQQKNEVGFLV CSALKKQYRDRLREGNEGIRFLWLTGGYNLVLHRMQQRAGHFMPESLLQSQFATLEAPGSNEPDVIPIDISSSIADVVEH CIAALSQENHVRAILSE
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=179, Percent_Identity=41.340782122905, Blast_Score=137, Evalue=4e-33, Organism=Escherichia coli, GI1790719, Length=166, Percent_Identity=59.0361445783133, Blast_Score=215, Evalue=1e-57, Organism=Escherichia coli, GI87082265, Length=162, Percent_Identity=48.7654320987654, Blast_Score=180, Evalue=6e-47, Organism=Caenorhabditis elegans, GI25146487, Length=168, Percent_Identity=41.0714285714286, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320454, Length=162, Percent_Identity=37.6543209876543, Blast_Score=117, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 19473; Mature: 19341
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPW CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHH LERLSDVAYSLQQKNEVGFLVCSALKKQYRDRLREGNEGIRFLWLTGGYNLVLHRMQQRA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHH GHFMPESLLQSQFATLEAPGSNEPDVIPIDISSSIADVVEHCIAALSQENHVRAILSE CCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHCC >Mature Secondary Structure SGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPW CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHH LERLSDVAYSLQQKNEVGFLVCSALKKQYRDRLREGNEGIRFLWLTGGYNLVLHRMQQRA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHH GHFMPESLLQSQFATLEAPGSNEPDVIPIDISSSIADVVEHCIAALSQENHVRAILSE CCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]