Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

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The map label for this gene is 153947158

Identifier: 153947158

GI number: 153947158

Start: 4619260

End: 4620030

Strand: Reverse

Name: 153947158

Synonym: YpsIP31758_4094

Alternate gene names: NA

Gene position: 4620030-4619260 (Counterclockwise)

Preceding gene: 153947597

Following gene: 153947989

Centisome position: 97.81

GC content: 46.3

Gene sequence:

>771_bases
ATGACTGACGAAAACTTACCTCAGGCCCCTACCGGTGAATTTGTGATGTTTTCCACTGAGGATGGCCAACTTCGTATTGA
ATGCCGTTTTGAAAGTGAAACTCTTTGGCTCCCTCAGGCAGCAATAGCAAATCTCTATCAAGTTACGCCTCAGGCGATCA
CGCAGCATATTAAGGCTATCTACGAAGACGGCGAACTTGAGCAAAGTGCAACCTGTAAGCCTTTCTTACAAGTTCGTCAG
GAAGGGACTCGGCAAGTAAATCGCAACACGATGCATTACAGCTTATCAGTAATACTTGCTGTGGGTTATCGGGTTCGTTC
GGTTCGTGAGACTCAGTTCCTCCAGTGGGCTACACAAACTTTGCAGGAATATCTGATTAAAGGTTTTGTGATGGATGATG
AGCGGCTGAAAAATCCGCCTGTTGGCCAGTCTGTAGTGCCGGATTACTTTGGCGAGATGTTGGAACGTATTCGCGATATC
CGTGCTAGTGAGCGACGGGTTTATCTGCGGGTTCGAGAGATCTTTGCTTTAGCCGCCGACTATGAGCCTTCATTACAAGA
GACGACCCGTTTTTTCCACGTTATTCAGAACAAATTACACTTTGCCTGTACCGGGCAAACAGCCGCAGAGCTTATCCACC
AACGAGCTGATGCCAACTTACCGAATATGGGGCTGACCAGTTTTAAAGGTAATGCAGTCCGTAAAAGTGATGTAATCATT
GCGAAGAACTATTTAAGTCAAAGTGAAGTTGATGACAGGCAAACACCTTAG

Upstream 100 bases:

>100_bases
AAGTCAGAACTCCAGGAAGGAAAATATCCAGAAACATCACTGTTTCGGGTAAATAAATATGAAAAAACTTACGGATGAGC
AAGATAAAAACGGAGATAGC

Downstream 100 bases:

>100_bases
CGATAATAAACCGCGATATGCTGGCCTTGTACTTTTTCTATGCTTATTTTTATATCAAAAATTTCTTCGAGGATCGAAGG
CTGCATAATTTCTGCTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAIYEDGELEQSATCKPFLQVRQ
EGTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQTLQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDI
RASERRVYLRVREIFALAADYEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVII
AKNYLSQSEVDDRQTP

Sequences:

>Translated_256_residues
MTDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAIYEDGELEQSATCKPFLQVRQ
EGTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQTLQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDI
RASERRVYLRVREIFALAADYEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVII
AKNYLSQSEVDDRQTP
>Mature_255_residues
TDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAIYEDGELEQSATCKPFLQVRQE
GTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQTLQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDIR
ASERRVYLRVREIFALAADYEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVIIA
KNYLSQSEVDDRQTP

Specific function: Unknown

COG id: COG3943

COG function: function code R; Virulence protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29409; Mature: 29277

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAI
CCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEECCHHHHHHHHHCCHHHHHHHHHHH
YEDGELEQSATCKPFLQVRQEGTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQT
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDIRASERRVYLRVREIFALAAD
HHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVII
CCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEE
AKNYLSQSEVDDRQTP
EHHHCCHHCCCCCCCC
>Mature Secondary Structure 
TDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAI
CCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEECCHHHHHHHHHCCHHHHHHHHHHH
YEDGELEQSATCKPFLQVRQEGTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQT
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDIRASERRVYLRVREIFALAAD
HHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVII
CCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEE
AKNYLSQSEVDDRQTP
EHHHCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA