| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is cysC [H]
Identifier: 153947128
GI number: 153947128
Start: 3711704
End: 3712345
Strand: Reverse
Name: cysC [H]
Synonym: YpsIP31758_3302
Alternate gene names: 153947128
Gene position: 3712345-3711704 (Counterclockwise)
Preceding gene: 153949941
Following gene: 153947709
Centisome position: 78.6
GC content: 50.0
Gene sequence:
>642_bases GTGCCAGCCCATCAGTTAGATGACCATAACCAAGAAACGCGGTCAGACGATGAGAATATCGTCTGGCACCCCCATGCGAT CACCCGACAGGATCGCGAACAACAGCACGGTCATCAGGGCGTAGTTCTTTGGTTTACCGGCCTGTCGGGTTCCGGGAAAT CCACTCTGGCCGGTGCGCTGGAACAAGCGTTGTTCGCTCGCGGTGTCAGTACTTACTTACTGGATGGTGATAACGTGCGC TATGGCCTCTGCCGCGATTTGGGCTTTTCTGACGCTGATCGTCGTGAAAATATCCGGCGGGTTGGCGAGGTGGCTAAACT GATGGTTGATGCCGGTCTGGTGGTCTTGACGGCGTTTATTTCCCCTCATCGGGCTGAACGGAAAATGGTACAAGATATGC TGGCATCGGGTCAGTTTATTGAGGTATTTGTCGATACGCCGTTAGCAATTTGTGAGGCCCGTGACCCGAAAGGCTTATAC AAAAAAGCCCGTGCCGGAGAGCTTAAAAATTTTACAGGGATCGATTCAGTTTATGAATCGCCTGCGTCTCCTGATATCCA TTTGCAGGGTGAACAATTAGTAACAAATTTGATTGAACAATTGTTAGACGTACTGCGTGGTAGAGCTATTATCAAATCCT AA
Upstream 100 bases:
>100_bases GAGAATCATGACTTCAGTACCTTTGAGCTGGAATTAAATGCCTTGGTTCGCCGTCATTTCCCACATTGGGGTGCGCGTGA TCTGCTGGGGGGGAAATAGC
Downstream 100 bases:
>100_bases ACGTATCCCCTTCGCACTTGACGCTACAGGGTCGTTCGCTGCAGGTATTCACTCGAATCACTGACGTTGTCAGCTAGCCG TGATTTATTTGCAGCCTACC
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGALEQALFARGVSTYLLDGDNVR YGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQFIEVFVDTPLAICEARDPKGLY KKARAGELKNFTGIDSVYESPASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS
Sequences:
>Translated_213_residues MPAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGALEQALFARGVSTYLLDGDNVR YGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQFIEVFVDTPLAICEARDPKGLY KKARAGELKNFTGIDSVYESPASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS >Mature_212_residues PAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGALEQALFARGVSTYLLDGDNVRY GLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQFIEVFVDTPLAICEARDPKGLYK KARAGELKNFTGIDSVYESPASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=200, Percent_Identity=49, Blast_Score=198, Evalue=3e-51, Organism=Homo sapiens, GI62912492, Length=213, Percent_Identity=46.4788732394366, Blast_Score=197, Evalue=8e-51, Organism=Homo sapiens, GI34447231, Length=213, Percent_Identity=46.4788732394366, Blast_Score=197, Evalue=8e-51, Organism=Escherichia coli, GI1789107, Length=197, Percent_Identity=79.6954314720812, Blast_Score=330, Evalue=3e-92, Organism=Caenorhabditis elegans, GI17542422, Length=200, Percent_Identity=48.5, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322852, Length=176, Percent_Identity=52.2727272727273, Blast_Score=200, Evalue=1e-52, Organism=Drosophila melanogaster, GI24667032, Length=174, Percent_Identity=50, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI24667028, Length=174, Percent_Identity=50, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI24667036, Length=174, Percent_Identity=50, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI24667040, Length=174, Percent_Identity=50, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI116007838, Length=174, Percent_Identity=50, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI24667044, Length=174, Percent_Identity=50, Blast_Score=178, Evalue=3e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 23658; Mature: 23527
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGAL CCCCCCCCCCCHHCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH EQALFARGVSTYLLDGDNVRYGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFI HHHHHHCCCHHEEECCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPHRAERKMVQDMLASGQFIEVFVDTPLAICEARDPKGLYKKARAGELKNFTGIDSVYES CCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHCC PASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS CCCCCEEECHHHHHHHHHHHHHHHHHCHHHHCC >Mature Secondary Structure PAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGAL CCCCCCCCCCHHCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH EQALFARGVSTYLLDGDNVRYGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFI HHHHHHCCCHHEEECCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPHRAERKMVQDMLASGQFIEVFVDTPLAICEARDPKGLYKKARAGELKNFTGIDSVYES CCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHCC PASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS CCCCCEEECHHHHHHHHHHHHHHHHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]