| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yhhZ [H]
Identifier: 153947090
GI number: 153947090
Start: 1576060
End: 1576539
Strand: Reverse
Name: yhhZ [H]
Synonym: YpsIP31758_1346
Alternate gene names: 153947090
Gene position: 1576539-1576060 (Counterclockwise)
Preceding gene: 153948266
Following gene: 153949485
Centisome position: 33.38
GC content: 39.79
Gene sequence:
>480_bases ATGGCTAACATGATTTATTTAACACTCAAGGGCAAAAAACAGGGGTTAATTTCGTCTGGGTGCTCATCAATTGACTCAAT AGGCAATAAAAGTCAAGGCAGTCACATAGATCAGATATTTGTGCTCAGCCTTAATCACGCCATGACCCGAGAACAAAACG TCAGCCACCACCCCATTTCTTTTATAAAACCTATCGATAAATCATCCCCCTTATTAGGGGTAGCCATATCAGAAAATGAA TTGCTTGATGCCGTTTTTGACTTTTATAGAACAAACAGCGCTGGTGCTTTAGAACTTTACTATACAATATCCATTACCGG CGCGACAATTTCAGACATATCAACTTCACACAGCCATTCAATCACACACAATGGCTCCCAACCACAAGAAACCATCTCTC TTAAATACAAAAGCATTACATGGAATCACAATGTAGCAGGAACCAGTGGTTATAGCATATGGGATGATCGCGTGTATTAA
Upstream 100 bases:
>100_bases CGTATTTATTTTAAGGTCAACGGCACTAAATGACTGGGATGAGCAAGGGCAACTAACCCCCTGCATCTTGAAGGCGACGG GTATATAAGGACATATGAGA
Downstream 100 bases:
>100_bases TTTATTCGGGGATGGCCTACGCCATCCCTTATTATTTACGTGTACATACGCCTTGCGGCAATATAAGGAATGGCACTTAA ATAACCTAATACTAAAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPISFIKPIDKSSPLLGVAISENE LLDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHSITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY
Sequences:
>Translated_159_residues MANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPISFIKPIDKSSPLLGVAISENE LLDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHSITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY >Mature_158_residues ANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPISFIKPIDKSSPLLGVAISENEL LDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHSITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hcp1 family [H]
Homologues:
Organism=Escherichia coli, GI1789850, Length=150, Percent_Identity=42.6666666666667, Blast_Score=105, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017728 - InterPro: IPR008514 [H]
Pfam domain/function: PF05638 DUF796 [H]
EC number: NA
Molecular weight: Translated: 17435; Mature: 17304
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPIS CCCEEEEEEECCCCCCHHHCCHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCHH FIKPIDKSSPLLGVAISENELLDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHS EECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCCCCCC ITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY CCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEECCCCCC >Mature Secondary Structure ANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPIS CCEEEEEEECCCCCCHHHCCHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCHH FIKPIDKSSPLLGVAISENELLDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHS EECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCCCCCC ITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY CCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]