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The map label for this gene is araC [C]

Identifier: 153937862

GI number: 153937862

Start: 2145779

End: 2146741

Strand: Direct

Name: araC [C]

Synonym: CLC_2023

Alternate gene names: 153937862

Gene position: 2145779-2146741 (Clockwise)

Preceding gene: 153937110

Following gene: 153937421

Centisome position: 57.06

GC content: 28.56

Gene sequence:

>963_bases
ATGAATCAGCAATTAAATATTCATGAATCGTTGCTTTTAGATAACGGTTTTCATAAATGTAATAACTGTAAAAAATATAA
TTCTATTGGAACTTGTTATGAATTAGCCACTGACATCGGATCAGGTTATTATTGGATTTATATTCATGGAAATCTTTTTT
CTATAGTAATCCATGATTTTTATTTTCACCAGGATTTTTATCTTGAAAGTTTACTTCCTGAGTATTTTAGTATTTCTTAT
TACGAATCCGTTTCTGGTGAAGAATTAAATCCTTATTCTCGCTTAAGTGCAGGATGTGTTAAAAGTTACTGGTGTAATAA
AACAACCTATAAAGCATTATTCCATAAAAACATTCCTATAAAATCTATAGGAATAGAATTTATGCCAAAATATTGCGACG
AATTTTTATCAAATAAACTTTCAGATGAGTATATAGATCCTCGCTCAGCTCTAATAAACGTTAATGAAACAACAGATTTT
CCTGAGATGGTCTTATTACTACATCAAATATTAAAATATAAAGGTAATGGTATCTCTGCTAAATTATTTTATGAGGGCAA
AGTTTCAGAAGCAATGGCACTTATATATGAAAGATATAACCAACATAAAAAAACTTATTCAAATCTTTCTCAGATAGATA
TAGACCATTTACAAAGTGTAGCTTCATATATTAATGATCATTATGCTAATGAATTAATACTATCCAAATTGTGTAAAATA
GCTTGCATGGGAAGTACTAAATTCAAAAAATCCTTCAAAGAATTATATAAATGTACTGCTACTGAATATATACAGCATCG
CCGTATGAGCCAAGCTGAACATCTTTTAGTAGATACGGATTTAACAATAGGTCTAGTTTCTAAAATTGTAGGTTATAAAA
GCGCTAGTAGATTTTCAGAACTTTTTAAAAAAAGCACTGGTTTATGTCCCGTTGAATATAGACATTTATCAAAGCGTTCT
TAA

Upstream 100 bases:

>100_bases
TTTTTAGTATATACTACAATAATGTTATTGATAATGCACATCATTGTCATTGGTCTATTCACGATATATTAGAGTCTAAT
CGCGGCAAAGGAGGCTTAAA

Downstream 100 bases:

>100_bases
TCAATAATCTAAAAATGCTAAAAATTTTATGGTAAACAAAAAGTTATCAAAATACTTTTATATCAGTACTTCGATAACTT
TTTATAATTTATTTTTACTA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcription Regulator; PAS Sensor Protein; ADA Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; Methylphosphotriester-DNA Alkyltransferase

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNQQLNIHESLLLDNGFHKCNNCKKYNSIGTCYELATDIGSGYYWIYIHGNLFSIVIHDFYFHQDFYLESLLPEYFSISY
YESVSGEELNPYSRLSAGCVKSYWCNKTTYKALFHKNIPIKSIGIEFMPKYCDEFLSNKLSDEYIDPRSALINVNETTDF
PEMVLLLHQILKYKGNGISAKLFYEGKVSEAMALIYERYNQHKKTYSNLSQIDIDHLQSVASYINDHYANELILSKLCKI
ACMGSTKFKKSFKELYKCTATEYIQHRRMSQAEHLLVDTDLTIGLVSKIVGYKSASRFSELFKKSTGLCPVEYRHLSKRS

Sequences:

>Translated_320_residues
MNQQLNIHESLLLDNGFHKCNNCKKYNSIGTCYELATDIGSGYYWIYIHGNLFSIVIHDFYFHQDFYLESLLPEYFSISY
YESVSGEELNPYSRLSAGCVKSYWCNKTTYKALFHKNIPIKSIGIEFMPKYCDEFLSNKLSDEYIDPRSALINVNETTDF
PEMVLLLHQILKYKGNGISAKLFYEGKVSEAMALIYERYNQHKKTYSNLSQIDIDHLQSVASYINDHYANELILSKLCKI
ACMGSTKFKKSFKELYKCTATEYIQHRRMSQAEHLLVDTDLTIGLVSKIVGYKSASRFSELFKKSTGLCPVEYRHLSKRS
>Mature_320_residues
MNQQLNIHESLLLDNGFHKCNNCKKYNSIGTCYELATDIGSGYYWIYIHGNLFSIVIHDFYFHQDFYLESLLPEYFSISY
YESVSGEELNPYSRLSAGCVKSYWCNKTTYKALFHKNIPIKSIGIEFMPKYCDEFLSNKLSDEYIDPRSALINVNETTDF
PEMVLLLHQILKYKGNGISAKLFYEGKVSEAMALIYERYNQHKKTYSNLSQIDIDHLQSVASYINDHYANELILSKLCKI
ACMGSTKFKKSFKELYKCTATEYIQHRRMSQAEHLLVDTDLTIGLVSKIVGYKSASRFSELFKKSTGLCPVEYRHLSKRS

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37110; Mature: 37110

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQLNIHESLLLDNGFHKCNNCKKYNSIGTCYELATDIGSGYYWIYIHGNLFSIVIHDF
CCCCCCHHHHHHHCCCCHHHCCCHHHCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH
YFHQDFYLESLLPEYFSISYYESVSGEELNPYSRLSAGCVKSYWCNKTTYKALFHKNIPI
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCH
KSIGIEFMPKYCDEFLSNKLSDEYIDPRSALINVNETTDFPEMVLLLHQILKYKGNGISA
HHHHHHHHHHHHHHHHHHCCCHHHCCCHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCEE
KLFYEGKVSEAMALIYERYNQHKKTYSNLSQIDIDHLQSVASYINDHYANELILSKLCKI
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACMGSTKFKKSFKELYKCTATEYIQHRRMSQAEHLLVDTDLTIGLVSKIVGYKSASRFSE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCHHHHHH
LFKKSTGLCPVEYRHLSKRS
HHHHCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MNQQLNIHESLLLDNGFHKCNNCKKYNSIGTCYELATDIGSGYYWIYIHGNLFSIVIHDF
CCCCCCHHHHHHHCCCCHHHCCCHHHCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH
YFHQDFYLESLLPEYFSISYYESVSGEELNPYSRLSAGCVKSYWCNKTTYKALFHKNIPI
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCH
KSIGIEFMPKYCDEFLSNKLSDEYIDPRSALINVNETTDFPEMVLLLHQILKYKGNGISA
HHHHHHHHHHHHHHHHHHCCCHHHCCCHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCEE
KLFYEGKVSEAMALIYERYNQHKKTYSNLSQIDIDHLQSVASYINDHYANELILSKLCKI
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACMGSTKFKKSFKELYKCTATEYIQHRRMSQAEHLLVDTDLTIGLVSKIVGYKSASRFSE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCHHHHHH
LFKKSTGLCPVEYRHLSKRS
HHHHCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA