| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is nudG [H]
Identifier: 153937421
GI number: 153937421
Start: 2149875
End: 2150273
Strand: Direct
Name: nudG [H]
Synonym: CLC_2027
Alternate gene names: 153937421
Gene position: 2149875-2150273 (Clockwise)
Preceding gene: 153937862
Following gene: 153935330
Centisome position: 57.17
GC content: 32.83
Gene sequence:
>399_bases ATGAAAAAATTAGTAAAAGTTATTGGTGCTATTGTAGAAAATGAAAATAATGAAATACTTTGTGCTCTTCGTTCTCCAAG AATGTCCCTTCCAAACATGTGGGAATTCCCTGGTGGTAAAATAGAAAAGGATGAAACTTTTAAACAAGCTATCGAAAGAG AGATTAGTGAGGAATTATCCTGCAGGGTTGAATTTATAGATGTTTTTAATGATACTACTCACGAATACGATGAGATTATA GTAAATTTAGTTACAGCTAGATGTAAACTAACATCTGATATACCAACAGCAAGTGAACATTCAAAATTAATATGGCTACA TAGAGAAAATTTACTTTCCCTAGATTGGGCTCCGGCAGACATTCCTGCTGTAAAAAAACTTGTACAAGAAAAGGTATAG
Upstream 100 bases:
>100_bases AATTATTGTTATCTTCTTTGTTTATCATTATTAGCTATCTCAAGTATCATTGCTACCAAAAAAAATTATTTTATGCTAAA ATTATTTAGAGGTGTTTATT
Downstream 100 bases:
>100_bases CAAATCATTGCTATACCTTTTTAACAAATTCATTATATAAATATGTTGGAACCTTATTGTATAATTTTATCTCAACAGTT ATAGGCTTTTCTCCTTTATA
Product: putative mutator mutT protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKKLVKVIGAIVENENNEILCALRSPRMSLPNMWEFPGGKIEKDETFKQAIEREISEELSCRVEFIDVFNDTTHEYDEII VNLVTARCKLTSDIPTASEHSKLIWLHRENLLSLDWAPADIPAVKKLVQEKV
Sequences:
>Translated_132_residues MKKLVKVIGAIVENENNEILCALRSPRMSLPNMWEFPGGKIEKDETFKQAIEREISEELSCRVEFIDVFNDTTHEYDEII VNLVTARCKLTSDIPTASEHSKLIWLHRENLLSLDWAPADIPAVKKLVQEKV >Mature_132_residues MKKLVKVIGAIVENENNEILCALRSPRMSLPNMWEFPGGKIEKDETFKQAIEREISEELSCRVEFIDVFNDTTHEYDEII VNLVTARCKLTSDIPTASEHSKLIWLHRENLLSLDWAPADIPAVKKLVQEKV
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=126, Percent_Identity=32.5396825396825, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1786288, Length=127, Percent_Identity=33.8582677165354, Blast_Score=69, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 15163; Mature: 15163
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVKVIGAIVENENNEILCALRSPRMSLPNMWEFPGGKIEKDETFKQAIEREISEELS CHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH CRVEFIDVFNDTTHEYDEIIVNLVTARCKLTSDIPTASEHSKLIWLHRENLLSLDWAPAD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCC IPAVKKLVQEKV CHHHHHHHHHCC >Mature Secondary Structure MKKLVKVIGAIVENENNEILCALRSPRMSLPNMWEFPGGKIEKDETFKQAIEREISEELS CHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH CRVEFIDVFNDTTHEYDEIIVNLVTARCKLTSDIPTASEHSKLIWLHRENLLSLDWAPAD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCC IPAVKKLVQEKV CHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]