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The map label for this gene is ybeQ [H]

Identifier: 153937616

GI number: 153937616

Start: 985763

End: 987469

Strand: Direct

Name: ybeQ [H]

Synonym: CLC_0961

Alternate gene names: 153937616

Gene position: 985763-987469 (Clockwise)

Preceding gene: 153935184

Following gene: 153935802

Centisome position: 26.21

GC content: 23.78

Gene sequence:

>1707_bases
TTGGATAGATTTAGTTTTCTAAAAATAGAATGGCCTGAAATATATCAAATTATATGTAATGTAGAAGAAAAATCAAAGGA
AGATTCTAATATAACATTAATTGAATTAGCACAGATAGCAGAATTAATAACAAAATACATATTAAAGGAAAACCATATTG
AAAAAAATACCGAACTATTAGATGAAATAAATTTATTAAAAGACTGTCACAATTTAAATGCTGATATAGTAGATTTTTTT
TATAAGATAATAATTGTTTCAAATAAAGCTATTTATGAAGACTATTCTGATTCAATTATAGCAAAGTCATTTTTAGATAA
AATGTTTGAAATATTGGTATGGTTTGCAATAGAGTACGGGAAAACAGACTATAGGAAAGTTGATTTGAGTAATATGATTC
CAGAAGATAAGGATATATTTAATAAATATATTAAAAGTAAATCATATAATTATACAGAAAAAAATATTGAAAATGAAACT
ATGATACAGCCATTTACTATAGAAAATGAAGAATTTTTTAAAGAAGAAAATAACGATGACATTAATAGATATGAGCAGGA
CGTATTTGAAACAAAGGAAGAATTTCATAAAAGAATAAGGAATCATGAGATATTTACTTTAGGTAGGATATTTATAGAAA
AATCTAATATTAATGAAACGGATGAGATTGTTGCATTCCCATTTTCTGTATATAAATCAATTCAAATTAAGATACCAATT
ATAGATATGTTATATATAGAAAGAGCTGAATTTGAAAATTTATCAATTGAAGAAGAGGAATATATACTATTTTCAAAATT
AGATATTATAAATGATAAAATTTGCATTGACATTAATAATATTTATATTGAAGTGAGTAATAATAAATGCAAAGTTCATG
CTGTAGTATTAGATATATCTTACTATGAAAGTTATGAAAAATATAGAAATATAATTTATTCTAAAAAACCTATTCCAATA
GGAATGATTAAATTTAATAAAAATAAGTATGATATTAATAAAAATGAAATGCCCGTTACAATTAATTATTATGATTGGAT
ACAAAAATATATTTTAAATACTAAGGCATACATAGAAATTCATAGATATGAAGCAAAAACCTTATGTAAAGAAAATTTGT
ATTATATTTTAAATGGGAAATTAGACATTTTTGATAAAAAACTTTTAATAAGAGAATATTACATTCAATCCAAAAGTTTA
AATAAAAATTTCAGAATAAATCTTCATAGTTCAGATCCAATGAATAAATTGAGGTGTTTAGTAGACAAAGAAGAAATATT
AGCAATGAATATTATAGGTGAAATGTATTGTAAGGAACAAAACTATAAAGAAGCAATGTATTGGTATAAAAAAGCAGCAG
AGAAAGGTAATTCTACTTCTATGAATAAGATAGGTGTCATGTATTATGAAGGAAAAGGAGTAGAACAAGACTACCAAAAA
GCAATGTATTGGTATAAAAAATCATCGCAGGAAGGAAACTTCACTGCTATGAGTAATATAGGGTCTATGTATTATAATGG
ACAGGGAGTAACGGAAGATTATAAAAAGGCAATGTATTGGTATAAAAAATCATACAAAGAAGGTAACTTTGGAGTTATGA
GAGATATAGGAAGTATGTATTATGAAGGAAAAGGAGTAATAAAGGACTATAAAAAAGCAATGCAATGTTATAAAAAAGCA
TCACAGATAGATAATTTTATTAAGTAG

Upstream 100 bases:

>100_bases
TCATATAAATTTATTAATATCACAATTACTAAGTTATTAATATAATAATTTTAGAGGGAATATAATGATTTAATAGATAA
TATATTTAGAGGTGTTTAAT

Downstream 100 bases:

>100_bases
ATTATAATTGATATAGGTTACTAAGTATATTATTCTTGGTAGCCTATATTTTTATCTCATGACTATCTGCCATGATACTC
CTATTTCTTCAAAAATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MDRFSFLKIEWPEIYQIICNVEEKSKEDSNITLIELAQIAELITKYILKENHIEKNTELLDEINLLKDCHNLNADIVDFF
YKIIIVSNKAIYEDYSDSIIAKSFLDKMFEILVWFAIEYGKTDYRKVDLSNMIPEDKDIFNKYIKSKSYNYTEKNIENET
MIQPFTIENEEFFKEENNDDINRYEQDVFETKEEFHKRIRNHEIFTLGRIFIEKSNINETDEIVAFPFSVYKSIQIKIPI
IDMLYIERAEFENLSIEEEEYILFSKLDIINDKICIDINNIYIEVSNNKCKVHAVVLDISYYESYEKYRNIIYSKKPIPI
GMIKFNKNKYDINKNEMPVTINYYDWIQKYILNTKAYIEIHRYEAKTLCKENLYYILNGKLDIFDKKLLIREYYIQSKSL
NKNFRINLHSSDPMNKLRCLVDKEEILAMNIIGEMYCKEQNYKEAMYWYKKAAEKGNSTSMNKIGVMYYEGKGVEQDYQK
AMYWYKKSSQEGNFTAMSNIGSMYYNGQGVTEDYKKAMYWYKKSYKEGNFGVMRDIGSMYYEGKGVIKDYKKAMQCYKKA
SQIDNFIK

Sequences:

>Translated_568_residues
MDRFSFLKIEWPEIYQIICNVEEKSKEDSNITLIELAQIAELITKYILKENHIEKNTELLDEINLLKDCHNLNADIVDFF
YKIIIVSNKAIYEDYSDSIIAKSFLDKMFEILVWFAIEYGKTDYRKVDLSNMIPEDKDIFNKYIKSKSYNYTEKNIENET
MIQPFTIENEEFFKEENNDDINRYEQDVFETKEEFHKRIRNHEIFTLGRIFIEKSNINETDEIVAFPFSVYKSIQIKIPI
IDMLYIERAEFENLSIEEEEYILFSKLDIINDKICIDINNIYIEVSNNKCKVHAVVLDISYYESYEKYRNIIYSKKPIPI
GMIKFNKNKYDINKNEMPVTINYYDWIQKYILNTKAYIEIHRYEAKTLCKENLYYILNGKLDIFDKKLLIREYYIQSKSL
NKNFRINLHSSDPMNKLRCLVDKEEILAMNIIGEMYCKEQNYKEAMYWYKKAAEKGNSTSMNKIGVMYYEGKGVEQDYQK
AMYWYKKSSQEGNFTAMSNIGSMYYNGQGVTEDYKKAMYWYKKSYKEGNFGVMRDIGSMYYEGKGVIKDYKKAMQCYKKA
SQIDNFIK
>Mature_568_residues
MDRFSFLKIEWPEIYQIICNVEEKSKEDSNITLIELAQIAELITKYILKENHIEKNTELLDEINLLKDCHNLNADIVDFF
YKIIIVSNKAIYEDYSDSIIAKSFLDKMFEILVWFAIEYGKTDYRKVDLSNMIPEDKDIFNKYIKSKSYNYTEKNIENET
MIQPFTIENEEFFKEENNDDINRYEQDVFETKEEFHKRIRNHEIFTLGRIFIEKSNINETDEIVAFPFSVYKSIQIKIPI
IDMLYIERAEFENLSIEEEEYILFSKLDIINDKICIDINNIYIEVSNNKCKVHAVVLDISYYESYEKYRNIIYSKKPIPI
GMIKFNKNKYDINKNEMPVTINYYDWIQKYILNTKAYIEIHRYEAKTLCKENLYYILNGKLDIFDKKLLIREYYIQSKSL
NKNFRINLHSSDPMNKLRCLVDKEEILAMNIIGEMYCKEQNYKEAMYWYKKAAEKGNSTSMNKIGVMYYEGKGVEQDYQK
AMYWYKKSSQEGNFTAMSNIGSMYYNGQGVTEDYKKAMYWYKKSYKEGNFGVMRDIGSMYYEGKGVIKDYKKAMQCYKKA
SQIDNFIK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=154, Percent_Identity=33.1168831168831, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI151301150, Length=144, Percent_Identity=30.5555555555556, Blast_Score=87, Evalue=6e-17,
Organism=Escherichia coli, GI87081769, Length=142, Percent_Identity=41.5492957746479, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1786867, Length=101, Percent_Identity=33.6633663366337, Blast_Score=74, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17563256, Length=228, Percent_Identity=23.2456140350877, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355295, Length=194, Percent_Identity=24.2268041237113, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 68016; Mature: 68016

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFSFLKIEWPEIYQIICNVEEKSKEDSNITLIELAQIAELITKYILKENHIEKNTELL
CCCCEEEEECCHHHHHHHHCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHH
DEINLLKDCHNLNADIVDFFYKIIIVSNKAIYEDYSDSIIAKSFLDKMFEILVWFAIEYG
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
KTDYRKVDLSNMIPEDKDIFNKYIKSKSYNYTEKNIENETMIQPFTIENEEFFKEENNDD
CCCCEEECHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCCEECCEEECCHHHHHCCCCCH
INRYEQDVFETKEEFHKRIRNHEIFTLGRIFIEKSNINETDEIVAFPFSVYKSIQIKIPI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHEEEEEHHHCCEEEEEEEE
IDMLYIERAEFENLSIEEEEYILFSKLDIINDKICIDINNIYIEVSNNKCKVHAVVLDIS
EHEEHHHHHCCCCCCCCCCCEEEEEEHHHCCCEEEEEEEEEEEEECCCEEEEEEEEEEEH
YYESYEKYRNIIYSKKPIPIGMIKFNKNKYDINKNEMPVTINYYDWIQKYILNTKAYIEI
HHHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCCEEEEHHHHHHHHHHCCEEEEEE
HRYEAKTLCKENLYYILNGKLDIFDKKLLIREYYIQSKSLNKNFRINLHSSDPMNKLRCL
EEHHHHHHHHCCCEEEEECCEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHH
VDKEEILAMNIIGEMYCKEQNYKEAMYWYKKAAEKGNSTSMNKIGVMYYEGKGVEQDYQK
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHH
AMYWYKKSSQEGNFTAMSNIGSMYYNGQGVTEDYKKAMYWYKKSYKEGNFGVMRDIGSMY
HHHHHHCCCCCCCEEEHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
YEGKGVIKDYKKAMQCYKKASQIDNFIK
CCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRFSFLKIEWPEIYQIICNVEEKSKEDSNITLIELAQIAELITKYILKENHIEKNTELL
CCCCEEEEECCHHHHHHHHCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHH
DEINLLKDCHNLNADIVDFFYKIIIVSNKAIYEDYSDSIIAKSFLDKMFEILVWFAIEYG
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
KTDYRKVDLSNMIPEDKDIFNKYIKSKSYNYTEKNIENETMIQPFTIENEEFFKEENNDD
CCCCEEECHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCCEECCEEECCHHHHHCCCCCH
INRYEQDVFETKEEFHKRIRNHEIFTLGRIFIEKSNINETDEIVAFPFSVYKSIQIKIPI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHEEEEEHHHCCEEEEEEEE
IDMLYIERAEFENLSIEEEEYILFSKLDIINDKICIDINNIYIEVSNNKCKVHAVVLDIS
EHEEHHHHHCCCCCCCCCCCEEEEEEHHHCCCEEEEEEEEEEEEECCCEEEEEEEEEEEH
YYESYEKYRNIIYSKKPIPIGMIKFNKNKYDINKNEMPVTINYYDWIQKYILNTKAYIEI
HHHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCCEEEEHHHHHHHHHHCCEEEEEE
HRYEAKTLCKENLYYILNGKLDIFDKKLLIREYYIQSKSLNKNFRINLHSSDPMNKLRCL
EEHHHHHHHHCCCEEEEECCEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHH
VDKEEILAMNIIGEMYCKEQNYKEAMYWYKKAAEKGNSTSMNKIGVMYYEGKGVEQDYQK
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHH
AMYWYKKSSQEGNFTAMSNIGSMYYNGQGVTEDYKKAMYWYKKSYKEGNFGVMRDIGSMY
HHHHHHCCCCCCCEEEHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
YEGKGVIKDYKKAMQCYKKASQIDNFIK
CCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]