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The map label for this gene is bioY [H]

Identifier: 153935184

GI number: 153935184

Start: 984810

End: 985358

Strand: Direct

Name: bioY [H]

Synonym: CLC_0960

Alternate gene names: 153935184

Gene position: 984810-985358 (Clockwise)

Preceding gene: 153936439

Following gene: 153937616

Centisome position: 26.19

GC content: 30.78

Gene sequence:

>549_bases
ATGGATAAAAAATTAAAAGTAAGAGATATGATATATTCAGCATTATTTGCAACTATTATAGGTGTTTCAAGTTATATTAT
TATTCCATTACCTATAAGTCCTGTACCTATAACAGCTCAAAGTTTAGCGGTTATGTTAGCAGGGTGTGTTTTAACTCCAA
TTCAAGTAGTTCTTAGTATGATAACTTTTTTATTAATGGGAATTATAGGTATTCCAGTTTTTTCTGGAGGAACAGCGGGA
TTTGGGATTATTGTAGGTAAAACCGGAGGATATTTAATTGGATTCTTAGTTGGAGCCATTATAATAAGTCTTTTAGTACA
TAAAAACAAATCTTTAGTTAACATGCTGATAGCTTGTTTTATTGGAGGAATTATAGTAGTACATATTTTAGGTTCAGCAT
GGCTTGGACAAGTTACTTCTATAGGAATAAAGAAAGCTTTTTTATTAGGTTCAGCACCTTTTATACCTGGGGATTTAATA
AAGGCTGTAGTAGCAGTTTTAATTGGAAGGAAATTAAGTAAGGAAATGAAAAGAATCGGAACACAATAA

Upstream 100 bases:

>100_bases
ACAGTTTTATTGTTAACATATACAAACAAAAAGGTTGACAATATTTTTTCCTCATAATATACTATTAATAACAAATTTAA
TAGATGAGGATATGAAAATT

Downstream 100 bases:

>100_bases
AAGTAATAAAAAATATATAAATGTAAAGCTATAAAAGTAGCTCTAAAAATCAAATACAATGTAATTTTATAAACTATTAA
GTGTCATGTATACTTAGTAG

Product: BioY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MDKKLKVRDMIYSALFATIIGVSSYIIIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSMITFLLMGIIGIPVFSGGTAG
FGIIVGKTGGYLIGFLVGAIIISLLVHKNKSLVNMLIACFIGGIIVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLI
KAVVAVLIGRKLSKEMKRIGTQ

Sequences:

>Translated_182_residues
MDKKLKVRDMIYSALFATIIGVSSYIIIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSMITFLLMGIIGIPVFSGGTAG
FGIIVGKTGGYLIGFLVGAIIISLLVHKNKSLVNMLIACFIGGIIVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLI
KAVVAVLIGRKLSKEMKRIGTQ
>Mature_182_residues
MDKKLKVRDMIYSALFATIIGVSSYIIIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSMITFLLMGIIGIPVFSGGTAG
FGIIVGKTGGYLIGFLVGAIIISLLVHKNKSLVNMLIACFIGGIIVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLI
KAVVAVLIGRKLSKEMKRIGTQ

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19058; Mature: 19058

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKLKVRDMIYSALFATIIGVSSYIIIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSM
CCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ITFLLMGIIGIPVFSGGTAGFGIIVGKTGGYLIGFLVGAIIISLLVHKNKSLVNMLIACF
HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IGGIIVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLIKAVVAVLIGRKLSKEMKRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
TQ
CC
>Mature Secondary Structure
MDKKLKVRDMIYSALFATIIGVSSYIIIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSM
CCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ITFLLMGIIGIPVFSGGTAGFGIIVGKTGGYLIGFLVGAIIISLLVHKNKSLVNMLIACF
HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IGGIIVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLIKAVVAVLIGRKLSKEMKRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
TQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]