Click here to switch to the map view.

The map label for this gene is 153937583

Identifier: 153937583

GI number: 153937583

Start: 100285

End: 101790

Strand: Direct

Name: 153937583

Synonym: CLC_0124

Alternate gene names: NA

Gene position: 100285-101790 (Clockwise)

Preceding gene: 153936823

Following gene: 153934841

Centisome position: 2.67

GC content: 22.44

Gene sequence:

>1506_bases
ATGAAATTTTTAATAGCATCAATAATAGGCGGAATAATAGGTTATCTTACTAATTGGATAGCTATAAAGATGTTATTTAG
ACCCTATGAAGAAAAAAGAATATTTGGTATGAAGGTTCCATTTACACCAGGACTTATTCCAAAAGAAAAAACTAGAATAG
CAAAAAGTGTAGGTAATGCTATAGGAGAGCATTTATTATCTAGTGAAATTATTGTAAAGTCTTTATGTAGTGAAAATATG
AATAATAGACTTAAAATTTGGATAAGACAAAAGGTATATTCTTTAATTACAACCAAAAAAACTTTGGAAGATAAATTTAA
AGAGTTTTTAGATTATAAATATGATTATTTTATAAACGCTTTAAAGGCAAGTTTGAGTAAGTTAACTATTAACAATTTAA
AAAATGAAAAGAATAGAGACAAAGTAAAACAAATTATAAAAATTAAATTAGACAAAATATTATCTCTTAAGGGTAACCAT
ATTACTAATAATTACATATATAAACAAATAAAAAGAGGTTTAATAAATAATACAAATGAGTATTTAAAATCAAATAATTT
TAAAGAGGTTTTAAAAAGTTTAATTATAGAAAATATAAAAGATGAGGAAGTTTTAAATAAAAAAATAGGTAATATAATTC
CTAATAACTTTACCTCAAATATAAAAGTATATGTTTATAGAAAGAAAGATAATTTGTCAAATTACATAAATGAAATGCTT
AAAGAAGAAGGAAATATAAATAAGTTAAAAAATATATTAAGAGAAGTTATAAATAATAATGTAAATTCTTTTATGTCAAT
GTTTATAGATGTAAATGCTATATCAGATAAAACAATTGTATTTTTAGAAGGATACTTACAAAGAGAAGAAACTAAAGAAG
AAATGGTATCCTTAGTGAATAAAAGCATAGATAAAATTTTAGATACAGATTTACAAGATATTATAGAAAATATACCAGAA
AATAATAAGGATGTAATTTTGAATGAAACAGTGGATATATTATGCCAAAAATTCCAAAATACAGAGATGATCTTAGAAAT
GATAGAAAAAATAGAAAGTCATTTTCAGGGAAAAAATTCTTTAAATGACATAATAGAAAAGATAAATATAAATCCATATA
AATTTATAAATAGTATTATAGATAAATTTATAGATAGTGAAAATTTTGAGGCTATAATTAATAATTTGATAAGTGATATA
ATTGAAAACTTTATGAAAACACCTATATATGAATTAACTCAAGGGAATGAAGAAGGAATATTGAATACTAGTTACCAAAC
GGTAAAAAATGTATATAATAGATTTATAGAGAATCAAGCAGAAGAGGTTATATCAATCCTGGATATATCTAGTATTGTAG
AAGATAGAATAAATGAGTTTGACGTATATTTGGCTGAAGAAATAATACTAGAAATATCTAGCAAAGAGTTAAAAGCCATA
ACCTGGTTGGGTGGATTATTAGGTGCTTTAATAGGAATTTTATCTCCTATATTAAGTAAAATATAG

Upstream 100 bases:

>100_bases
TTGTTTTTGGTACATAATATATTGAAAGTAGTAAATTTACAATTTATAATTTATTTTGTAATATATTATCATAAAATATT
AAAGTGAGGAGTTTGAAAAA

Downstream 100 bases:

>100_bases
CTGATTTTCCGGTCAGTTTTAATTTTTGAAGATAATGGTTTTGACTAATTGAAAAATTTTAATTATAATATATAGAAAAT
GAAAAATTATTAAGAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKTRIAKSVGNAIGEHLLSSEIIVKSLCSENM
NNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINALKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNH
ITNNYIYKQIKRGLINNTNEYLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML
KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVNKSIDKILDTDLQDIIENIPE
NNKDVILNETVDILCQKFQNTEMILEMIEKIESHFQGKNSLNDIIEKININPYKFINSIIDKFIDSENFEAIINNLISDI
IENFMKTPIYELTQGNEEGILNTSYQTVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI
TWLGGLLGALIGILSPILSKI

Sequences:

>Translated_501_residues
MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKTRIAKSVGNAIGEHLLSSEIIVKSLCSENM
NNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINALKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNH
ITNNYIYKQIKRGLINNTNEYLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML
KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVNKSIDKILDTDLQDIIENIPE
NNKDVILNETVDILCQKFQNTEMILEMIEKIESHFQGKNSLNDIIEKININPYKFINSIIDKFIDSENFEAIINNLISDI
IENFMKTPIYELTQGNEEGILNTSYQTVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI
TWLGGLLGALIGILSPILSKI
>Mature_501_residues
MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKTRIAKSVGNAIGEHLLSSEIIVKSLCSENM
NNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINALKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNH
ITNNYIYKQIKRGLINNTNEYLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML
KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVNKSIDKILDTDLQDIIENIPE
NNKDVILNETVDILCQKFQNTEMILEMIEKIESHFQGKNSLNDIIEKININPYKFINSIIDKFIDSENFEAIINNLISDI
IENFMKTPIYELTQGNEEGILNTSYQTVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI
TWLGGLLGALIGILSPILSKI

Specific function: Unknown

COG id: COG4399

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0754 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007383
- InterPro:   IPR016991 [H]

Pfam domain/function: PF04286 DUF445 [H]

EC number: NA

Molecular weight: Translated: 57998; Mature: 57998

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKTRIAKSVGNA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHH
IGEHLLSSEIIVKSLCSENMNNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNHITNNYIYKQIKRGLINNTNE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
YLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVN
HCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
KSIDKILDTDLQDIIENIPENNKDVILNETVDILCQKFQNTEMILEMIEKIESHFQGKNS
HHHHHHHCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCH
LNDIIEKININPYKFINSIIDKFIDSENFEAIINNLISDIIENFMKTPIYELTQGNEEGI
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
LNTSYQTVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWLGGLLGALIGILSPILSKI
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKTRIAKSVGNA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHH
IGEHLLSSEIIVKSLCSENMNNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNHITNNYIYKQIKRGLINNTNE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
YLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVN
HCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
KSIDKILDTDLQDIIENIPENNKDVILNETVDILCQKFQNTEMILEMIEKIESHFQGKNS
HHHHHHHCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCH
LNDIIEKININPYKFINSIIDKFIDSENFEAIINNLISDIIENFMKTPIYELTQGNEEGI
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
LNTSYQTVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWLGGLLGALIGILSPILSKI
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA