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The map label for this gene is trg [C]

Identifier: 153937323

GI number: 153937323

Start: 623207

End: 625198

Strand: Direct

Name: trg [C]

Synonym: CLC_0609

Alternate gene names: 153937323

Gene position: 623207-625198 (Clockwise)

Preceding gene: 153935071

Following gene: 153934918

Centisome position: 16.57

GC content: 28.51

Gene sequence:

>1992_bases
ATGAAAAACAAAAGTATAAAACGTATAATTTCTACATTACTTATTTTTGTAGCCTTAATTCCTATATTAATTGTTGGGGT
GTATACTAATTATTCACAAACTAAAAGTTTAAAAAGTAATTTTGAATCATCAACTAAAAATTCCGTACTTAGCTTTAAAA
GTATGATAGCACAAAAAAATAAAAATAATATGGAATCAATTAACACTTTGGCTAATGATGGTAATGCTAAAAATTTACTC
AAAAATAAGGATAATGCTAATTGGCTCTTCTATGCATTAGAGGCTTTTAGAAGTTCTCATTCTGAAATTACAAATGTTTA
TCTAGGAACAGTTAAAGGAAATACTATATTTTCACCTAAAACTGATGTAGTTAATAGCATTGATCCAAGAACAAGACCTT
GGTATAAGAAGGCAGTTGAAATGAAAGGAGATCCTATTATTACAGAACCATACAAAGATACATCAGGTACCAATAGTCTA
ATGGTAACCATATCTAAAGCTGTTGTAGATGAGAAAGATTCTTTAGTTGGAGTAATTGGTATGGACATAAAATTAGATGA
TTTATCGGCTATTGCTAAAAATACTAAGATTGGTAAAGAGGGATTTGTGGTATTGGTCGATAAAAATGGTTCTATTATAG
GACATAAAGATAAAGAAAAATTAAATAAAAATATAAAAGATTTAAATTGGCCTAAAGAAATACTGAATAAGGGAATTATA
GATAAAGTAAAAATTGATGGAAAAGAGTATAAAGTTATAACAGAAAAAGATGGAGCAACATCCTGGAGCATTGTAGGATT
TTTACCTTATAGTGAGATACAATCTGAACTTAATAAATATTATAGAATGATAGTTATAATATCACTTTTATCTTTGGCAG
GAGCATTAGCAATAGGAGGACTATTCTCTAAAAAAATAATAAATCCTATAAGAAAAATAGAAGATGCATTAGCCTGTATG
AAGGATGGAGATTTTACCAAAAGCATAGATAAGGGGGAAACTTCAATTTATGAGATGGAATTAATTATGGATGGAATTAA
TACAGTGAGAGAAGAAACAGTAAAAATTTTAGATAGTCTTAAAAGTGTTTCTTCTGATGTAAAAGAGTCTTCAGATATTT
TAAAAAATATAACAGAGCAATCAGAAATGGCAGGAAATGAAATAGTACAAGTAGTACAAAATATAGCAGATGCAACTTCA
GATCAGGCTCAGTCTATGGAAGGAAGTTTAAATTCTATAAGTGATTTATCAGACAAAGTAGAAAATTCTATGGAAAATTC
TAAGGAAATGGTTAAAGAGTCTGATATAGTCAGAAATATTATAAAAGATAGTGGACAGGCTGTAAAAGGGCTAAAAAATA
AATTTGAATTGAACTCTAAATCAAATCAGGAATTAGCTAATAAAATTGATACATTAGCAGAAAGCTCAAATCAAATAAGT
ATAATAACAGAAACAATACAATCTATAACAGAACAAACCTCTTTATTAGCACTTAATGCTAGTATAGAATCTGCAAGGGC
AGGAGAAGCGGGAAAAGGATTTGCAGTAGTTGCAGAAGAGGTAAGGAAGCTTGCAGAACAATCCTCAACTTCAGCTTCAG
AAATAGAAAGAGTTATTTTTAACATAAATAAAGAAGTAAAAGATATACTAGATAAAATGTATGAAACTATAGAACTTGAA
AAGGATACTAAGGATAAAATTGATATTACAGACAATGCTTTTAATACTATAAGAAAATCTATAGATAAATTAGAAGAAAG
CATAAGAAATGTTAATGAATCACAAAAAATTATATATAATAATAAAAACGATATATTAAATAAAATAAATGAGGCATCCT
CTGTGTCGGAAGAGATAGCAGCAACTACTGAAGAAATAACTGCATCAGCGGAGGAACAAGCAGCGGGACTTAAAGAGGTA
GTAGGATCTGCAGAAAAATTAAATTCTTATTCAGATACATTAAATTCACTAGTAAAACAATTTAAGATATAA

Upstream 100 bases:

>100_bases
AATAAATTAACATCAATACTAAAAATTATGTTTAACTGTTAATTGTTTGTAGTATAATATAATATAAATTATCACAATTT
TTGTAAAACGGGGGGATTTT

Downstream 100 bases:

>100_bases
GTTTGAAAAGGCTGGCAATAATAATATTGCTGGCTTTTTTGCTTATAAAATATTAAATAAGTTTCAATATGTCTTCAAAA
TTAAATCTATTTTAAGATGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKNKNNMESINTLANDGNAKNLL
KNKDNANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPKTDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSL
MVTISKAVVDEKDSLVGVIGMDIKLDDLSAIAKNTKIGKEGFVVLVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGGLFSKKIINPIRKIEDALACM
KDGDFTKSIDKGETSIYEMELIMDGINTVREETVKILDSLKSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATS
DQAQSMEGSLNSISDLSDKVENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIFNINKEVKDILDKMYETIELE
KDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYNNKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEV
VGSAEKLNSYSDTLNSLVKQFKI

Sequences:

>Translated_663_residues
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKNKNNMESINTLANDGNAKNLL
KNKDNANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPKTDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSL
MVTISKAVVDEKDSLVGVIGMDIKLDDLSAIAKNTKIGKEGFVVLVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGGLFSKKIINPIRKIEDALACM
KDGDFTKSIDKGETSIYEMELIMDGINTVREETVKILDSLKSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATS
DQAQSMEGSLNSISDLSDKVENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIFNINKEVKDILDKMYETIELE
KDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYNNKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEV
VGSAEKLNSYSDTLNSLVKQFKI
>Mature_663_residues
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKNKNNMESINTLANDGNAKNLL
KNKDNANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPKTDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSL
MVTISKAVVDEKDSLVGVIGMDIKLDDLSAIAKNTKIGKEGFVVLVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGGLFSKKIINPIRKIEDALACM
KDGDFTKSIDKGETSIYEMELIMDGINTVREETVKILDSLKSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATS
DQAQSMEGSLNSISDLSDKVENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIFNINKEVKDILDKMYETIELE
KDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYNNKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEV
VGSAEKLNSYSDTLNSLVKQFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=251, Percent_Identity=29.8804780876494, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI2367378, Length=257, Percent_Identity=26.4591439688716, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788194, Length=399, Percent_Identity=23.3082706766917, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788195, Length=185, Percent_Identity=31.8918918918919, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789453, Length=71, Percent_Identity=53.5211267605634, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 73254; Mature: 73254

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00589 PTS_HPR_SER ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNNMESINTLANDGNAKNLLKNKDNANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPK
CCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHEEEEEECCCEECCCC
TDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSLMVTISKAVVDEKDSLVGVIG
HHHHHCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEEHHHHHCCCCCEEEEEE
MDIKLDDLSAIAKNTKIGKEGFVVLVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
CCEEEHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCHHHHCCCCCCCCCHHHHHCCCCC
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGG
HHEEECCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSKKIINPIRKIEDALACMKDGDFTKSIDKGETSIYEMELIMDGINTVREETVKILDSL
HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATSDQAQSMEGSLNSISDLSDKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHH
ENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCH
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIF
HHHHHHHHHHHHHHHEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
NINKEVKDILDKMYETIELEKDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYN
HCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
NKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEVVGSAEKLNSYSDTLNSLVKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
FKI
HCC
>Mature Secondary Structure
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNNMESINTLANDGNAKNLLKNKDNANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPK
CCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHEEEEEECCCEECCCC
TDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSLMVTISKAVVDEKDSLVGVIG
HHHHHCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEEHHHHHCCCCCEEEEEE
MDIKLDDLSAIAKNTKIGKEGFVVLVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
CCEEEHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCHHHHCCCCCCCCCHHHHHCCCCC
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGG
HHEEECCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSKKIINPIRKIEDALACMKDGDFTKSIDKGETSIYEMELIMDGINTVREETVKILDSL
HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATSDQAQSMEGSLNSISDLSDKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHH
ENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCH
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIF
HHHHHHHHHHHHHHHEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
NINKEVKDILDKMYETIELEKDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYN
HCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
NKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEVVGSAEKLNSYSDTLNSLVKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
FKI
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA