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The map label for this gene is 153937059

Identifier: 153937059

GI number: 153937059

Start: 670737

End: 671057

Strand: Direct

Name: 153937059

Synonym: CLC_0652

Alternate gene names: NA

Gene position: 670737-671057 (Clockwise)

Preceding gene: 153935177

Following gene: 153936392

Centisome position: 17.84

GC content: 29.28

Gene sequence:

>321_bases
ATGGCTAGGAAAGATTCTATTGAAATTGGAGAACTAACTGATTCAGCTTTTTATATTTTAGCTAGTGTTATTGAGGAAAA
ACACGGATACTTAATCATGAAAGTTATTGAAAAATTTACTAATGGTGAAGTGACTATTGGACCAGCATCCCTTTATACCA
CATTAAAAAAACTTTTAATATCAGGATTGGTTGAATTAAACCCTAATATACATGAAAACAAGAAGGTTTATAGGATAACA
GATAAAGGAAAAGAAATGCTTGTACAAGAAATAAATCGTAAAAAGCAGATGATTACCTTTGCTGAAAATTTTTTGAAGTA
G

Upstream 100 bases:

>100_bases
TTGACTGATATATCATTTAATGATATATTGTATTTAATGATATATCATTAAATGATATATAGAATTTCATGGTACATAAA
AAGATGGGAAGGAGAATTTT

Downstream 100 bases:

>100_bases
AAAGGGATGATATCTATGAAAAATAAATATGTAATGATTGGTGGATTTGCATTTAGTGAAGAAAGTGATATGGAAAAACT
AAGAAATTATGCAAAAAAGG

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PadR Family; Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; PadR Family Regulatory Protein

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVTIGPASLYTTLKKLLISGLVELNPNIHENKKVYRIT
DKGKEMLVQEINRKKQMITFAENFLK

Sequences:

>Translated_106_residues
MARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVTIGPASLYTTLKKLLISGLVELNPNIHENKKVYRIT
DKGKEMLVQEINRKKQMITFAENFLK
>Mature_105_residues
ARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVTIGPASLYTTLKKLLISGLVELNPNIHENKKVYRITD
KGKEMLVQEINRKKQMITFAENFLK

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12132; Mature: 12001

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVTIGPASLYTTLKKLLI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHH
SGLVELNPNIHENKKVYRITDKGKEMLVQEINRKKQMITFAENFLK
HHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVTIGPASLYTTLKKLLI
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHH
SGLVELNPNIHENKKVYRITDKGKEMLVQEINRKKQMITFAENFLK
HHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA