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The map label for this gene is 153936979

Identifier: 153936979

GI number: 153936979

Start: 661855

End: 662367

Strand: Direct

Name: 153936979

Synonym: CLC_0646

Alternate gene names: NA

Gene position: 661855-662367 (Clockwise)

Preceding gene: 153936915

Following gene: 153934999

Centisome position: 17.6

GC content: 30.21

Gene sequence:

>513_bases
ATGTTATCATATTATGCATTTATATTTTTTGCTAAAATCATGGAAGTTGCACTAATGACGATTAGAACCGTTTTAATCAC
TCGTGGTGAAAAATTATATGGGTCAATTATAGGGTTTATAGAAGTAACTATATGGCTTTATGTAACTAGTTCTGTTTTAA
GTGGAATTAAAGACGACCCTATAAGAATGGTAGTTTATGCTTTAGGTTTTACTTGTGGTAATTATATGGGCTGTGTAATA
GAAGAAAAATTAGCTATAGGCCTATTAACTATAAATGTTATAACTTCAGAATCAGATGGTAAAAGATTGGCAGAAATATT
AAGGGATGAAAATGTAGGAGTAACTATGGTAGATGCAGAAGGAAAAATAGAACAAAAGAAAATGCTTATAATACACGCTA
AGAGAAAGAGAAGAGAGGAAATCATAAGAACTATAGAAGGTAGCGATATAAATGCAATGATATCTGTAAATGATATAAAG
ACTGTTTATGGAGGCTATGGTATAAGAAAATGA

Upstream 100 bases:

>100_bases
TACCATTAACAATTGATCATTTTCCATATATAATATGTTGTGGCTGATGATTAGGAATTATATTTTGTATTAAAAATAAG
GAGATAGGGGGACTGGTTAA

Downstream 100 bases:

>100_bases
AATATATTTAGTCTTAACACTACAAATAAAAAATACACTAATAAACTCATGCGTTTATTACGTGTATTTTTTTATTTGCT
ATATTAGAATTAAATGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLSYYAFIFFAKIMEVALMTIRTVLITRGEKLYGSIIGFIEVTIWLYVTSSVLSGIKDDPIRMVVYALGFTCGNYMGCVI
EEKLAIGLLTINVITSESDGKRLAEILRDENVGVTMVDAEGKIEQKKMLIIHAKRKRREEIIRTIEGSDINAMISVNDIK
TVYGGYGIRK

Sequences:

>Translated_170_residues
MLSYYAFIFFAKIMEVALMTIRTVLITRGEKLYGSIIGFIEVTIWLYVTSSVLSGIKDDPIRMVVYALGFTCGNYMGCVI
EEKLAIGLLTINVITSESDGKRLAEILRDENVGVTMVDAEGKIEQKKMLIIHAKRKRREEIIRTIEGSDINAMISVNDIK
TVYGGYGIRK
>Mature_170_residues
MLSYYAFIFFAKIMEVALMTIRTVLITRGEKLYGSIIGFIEVTIWLYVTSSVLSGIKDDPIRMVVYALGFTCGNYMGCVI
EEKLAIGLLTINVITSESDGKRLAEILRDENVGVTMVDAEGKIEQKKMLIIHAKRKRREEIIRTIEGSDINAMISVNDIK
TVYGGYGIRK

Specific function: Unknown

COG id: COG4843

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0316 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y163_CLOBK (B1IDK9)

Other databases:

- EMBL:   CP000939
- RefSeq:   YP_001780232.1
- GeneID:   6148832
- GenomeReviews:   CP000939_GR
- KEGG:   cbb:CLD_0163
- HOGENOM:   HBG542119
- OMA:   AFIISYE
- ProtClustDB:   CLSK971664
- BioCyc:   CBOT498213:CLD_0163-MONOMER
- HAMAP:   MF_01515
- InterPro:   IPR019264
- InterPro:   IPR022930

Pfam domain/function: PF10035 DUF2179

EC number: NA

Molecular weight: Translated: 19098; Mature: 19098

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x18e49478)-; HASH(0x19ef2f08)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYYAFIFFAKIMEVALMTIRTVLITRGEKLYGSIIGFIEVTIWLYVTSSVLSGIKDDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IRMVVYALGFTCGNYMGCVIEEKLAIGLLTINVITSESDGKRLAEILRDENVGVTMVDAE
HHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEECC
GKIEQKKMLIIHAKRKRREEIIRTIEGSDINAMISVNDIKTVYGGYGIRK
CCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCCCCH
>Mature Secondary Structure
MLSYYAFIFFAKIMEVALMTIRTVLITRGEKLYGSIIGFIEVTIWLYVTSSVLSGIKDDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IRMVVYALGFTCGNYMGCVIEEKLAIGLLTINVITSESDGKRLAEILRDENVGVTMVDAE
HHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEECC
GKIEQKKMLIIHAKRKRREEIIRTIEGSDINAMISVNDIKTVYGGYGIRK
CCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA