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The map label for this gene is 153936915

Identifier: 153936915

GI number: 153936915

Start: 660592

End: 661458

Strand: Direct

Name: 153936915

Synonym: CLC_0645

Alternate gene names: NA

Gene position: 660592-661458 (Clockwise)

Preceding gene: 153937799

Following gene: 153936979

Centisome position: 17.57

GC content: 31.37

Gene sequence:

>867_bases
TTGGAAAAAATTGCATTGATTACTGATACAACTAGTGATTTACCAGAAGATATACTAGAAAAATATAACATAAAGCAGCT
AGCTTTTAGAATAATATATAAAGATAGAGAACTTAAAGATAGATTTGATATAACTTCTAAAGAGGTTTATGAAAATTTAG
AAGTAGAAGTTCCTACATCCTCACTACCATCTATGGAGGATATGGATAATCTTTTTACAGAGTTAGAGGAAGAAGGATAT
ACCCATGTAATAGCTGTAGTTTTATCCAGTGGATTATCAGGAATATATAATGGAATGAAAATAGTAAGTGAAAACCATCC
GAAACTTACAACATATATATGTGATTCTAAATCTATATCCTTAGGTGAAGGCGTATTACTAATGGAATCTGCAAGAATGC
TAGAAGAGGGTAAAAGTTTTAATCAAATAGTTGAGGCTATTCCTAAAATAAGAGAAAATGTTAAAACATTTTTTGTGGTG
GGAACCCTTGAATATCTAAAAAAAGGTGGAAGAATAGGAAAAGTTGCTGGAACTATAGCAGAGCTTTTAAATATTAAACC
TATAATTTCTATAGATAATGAAGACGGCAAATATTATACATATACAAAAGTAAGGGGAAGAAAACAATCTTTAGCTAACC
TTATAGATATAGCAAAAGAATTTTTGGAAAAAGGTAAATGTAAAATTTATGTTATGCACGGAAATGCAGAAGAAGAGGCT
AAGGCTGTTTTTGAGAAGCTTAAAAACTTACCAAATGTTACTTTTGCTATGCTTGGAGGATGTATAAGCCCTGTTTCAGG
TGCTCATAGTGGTCCAGGTCTAGTGGGTGTTGCATGCCTTAGAGATATGGATTATTGTGGAAATTAA

Upstream 100 bases:

>100_bases
AAAATTTATTATATCTTATTTTTTTGAATCTATTGTCATATAATATTAAAGTGTTATAATTAACCTATATTCATATATGG
TTATTTAGGAGGAATTTCAA

Downstream 100 bases:

>100_bases
TTTGGATTTACAAATAATAATATTAGTAAATTATCTAAGCAAATGTAATGAAAAACTAAATAAATTAAAAGCCTTAATCA
TAAAGTAAATTTTTTTTTAA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTSSLPSMEDMDNLFTELEEEGY
THVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSISLGEGVLLMESARMLEEGKSFNQIVEAIPKIRENVKTFFVV
GTLEYLKKGGRIGKVAGTIAELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKIYVMHGNAEEEA
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN

Sequences:

>Translated_288_residues
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTSSLPSMEDMDNLFTELEEEGY
THVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSISLGEGVLLMESARMLEEGKSFNQIVEAIPKIRENVKTFFVV
GTLEYLKKGGRIGKVAGTIAELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKIYVMHGNAEEEA
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN
>Mature_288_residues
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTSSLPSMEDMDNLFTELEEEGY
THVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSISLGEGVLLMESARMLEEGKSFNQIVEAIPKIRENVKTFFVV
GTLEYLKKGGRIGKVAGTIAELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKIYVMHGNAEEEA
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 32025; Mature: 32025

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTS
CCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCEECCCC
SLPSMEDMDNLFTELEEEGYTHVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSIS
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCHHHCCCCCCEEEEEEECCCCCC
LGEGVLLMESARMLEEGKSFNQIVEAIPKIRENVKTFFVVGTLEYLKKGGRIGKVAGTIA
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCCCHHHHHHHH
ELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKIYVMHGNAEEEA
HHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN
HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTS
CCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCEECCCC
SLPSMEDMDNLFTELEEEGYTHVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSIS
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCHHHCCCCCCEEEEEEECCCCCC
LGEGVLLMESARMLEEGKSFNQIVEAIPKIRENVKTFFVVGTLEYLKKGGRIGKVAGTIA
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCCCHHHHHHHH
ELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKIYVMHGNAEEEA
HHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN
HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]