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The map label for this gene is 153936802

Identifier: 153936802

GI number: 153936802

Start: 439614

End: 440867

Strand: Direct

Name: 153936802

Synonym: CLC_0442

Alternate gene names: NA

Gene position: 439614-440867 (Clockwise)

Preceding gene: 153936558

Following gene: 153937570

Centisome position: 11.69

GC content: 24.56

Gene sequence:

>1254_bases
ATGGAAATACTTTCTGTAGGGCAAAAAATTAAAAGAGCTAGGGTTTATAAAGGGTATACCCTAAAAGAATTATGTGGAGA
TATCATATCTGTATCTAAAATGAGTTGTATAGAAAATGATAAAATAAGGCCAGATGATGAAATACTAAAAATTATATCAG
AAGAGTTAGAAATAGATATTAAGTATTTAAAAGCTGGAGTAAAAGAGCAACTTTTAGATAATATTGATAAGCTTAAAGAT
AACAAAAATTCATCGGATTATGAAAAAATTCTAGAATATAATTTAAAATATGCAGAAGAATATAAATATTATCACATAGC
ATTTTATATAATACATATGCTATTTAATTATTATCTAGAAAATAGTGAAATAGAGAAGCTACAGCTTATAATATCTAAGT
ATTATGACTATTGGCTAAAATCTGGTATAGATGACAATAAAATAATTTATTATATGGACATTGCTAAGTTTTTCTTTGAA
ACTAAGGAATATATAGAAGCGGCTAGTTATTATAGGAGTATTAGAAAAATTGCCCATGAAAAAAATAATTATATACTGTT
ATCTGAGGCTACATATGATGAAGCGGCTTGTTATATAAAGATAAAAGAATTTGATAAAGCTTATGAAATAGCTGTAAGTC
TTATAGACTTAATAGATTTTTTAGATAATAATATTAAAAAAGCGGAAGTTTATAAAATATTAGCTATTTTATCTTTAAGA
TTAGATAGAAAAAAATTTGAGAATTATGAAGAAAAATCTTATGTATTATATGGGAATGATTTAATTCATAAGGCAGATGC
TACATTTAAATATGCCACGGCTATGTTTGATATAGGCGAAAAGGATAAAGGAATAAGCTATATAAATAAAGCTTTAGATT
TATATCCTAAAAATAATACAAGGGCTTTTGTATCCTTTATGTTAGATACTATGAAAGTTCTATTAAAAAATGATGTATTA
TATAGAGCTCAAGAAATTTCAGACGAAATATTAAATTATGCTATAAAGATAAATAATATAAGATTTATAGAAAAAGCTTA
CTATTATAAAGCTATAATTTTAGAAAAACAAGGAAGTTTAGATACTGCTGAAATGTATATGAATCTTTCTTTAGATTCTA
TACTAAAGTTTGGAACAAAACAGGAAATATATGAAAGATACATGAAGATGGGAAATATGTATCACAAGATGAACCAGGTA
GGAGAGTCTATAAAGTATTTTAATTTAGCAATTAAGCTTTCCAAAAAACTTTAG

Upstream 100 bases:

>100_bases
GAAGCGGCTAAATATTTAAATGAAGGTGTAGAAATGTTCAAGGAAGTAGGATTATTAAAAGACATGTAAGTAGATTTATT
TTGTGGATGGGTGAGATTTT

Downstream 100 bases:

>100_bases
TATATAAAAAACTATGACTTAAAAGGGTGTTATACTACCCTTAGTTTAAAAAAGGATATGTGGTTAGAAAGACAACTCAC
TTTGATAAGAGATTCTAATT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Ferrous Iron Transport Protein B-Like Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MEILSVGQKIKRARVYKGYTLKELCGDIISVSKMSCIENDKIRPDDEILKIISEELEIDIKYLKAGVKEQLLDNIDKLKD
NKNSSDYEKILEYNLKYAEEYKYYHIAFYIIHMLFNYYLENSEIEKLQLIISKYYDYWLKSGIDDNKIIYYMDIAKFFFE
TKEYIEAASYYRSIRKIAHEKNNYILLSEATYDEAACYIKIKEFDKAYEIAVSLIDLIDFLDNNIKKAEVYKILAILSLR
LDRKKFENYEEKSYVLYGNDLIHKADATFKYATAMFDIGEKDKGISYINKALDLYPKNNTRAFVSFMLDTMKVLLKNDVL
YRAQEISDEILNYAIKINNIRFIEKAYYYKAIILEKQGSLDTAEMYMNLSLDSILKFGTKQEIYERYMKMGNMYHKMNQV
GESIKYFNLAIKLSKKL

Sequences:

>Translated_417_residues
MEILSVGQKIKRARVYKGYTLKELCGDIISVSKMSCIENDKIRPDDEILKIISEELEIDIKYLKAGVKEQLLDNIDKLKD
NKNSSDYEKILEYNLKYAEEYKYYHIAFYIIHMLFNYYLENSEIEKLQLIISKYYDYWLKSGIDDNKIIYYMDIAKFFFE
TKEYIEAASYYRSIRKIAHEKNNYILLSEATYDEAACYIKIKEFDKAYEIAVSLIDLIDFLDNNIKKAEVYKILAILSLR
LDRKKFENYEEKSYVLYGNDLIHKADATFKYATAMFDIGEKDKGISYINKALDLYPKNNTRAFVSFMLDTMKVLLKNDVL
YRAQEISDEILNYAIKINNIRFIEKAYYYKAIILEKQGSLDTAEMYMNLSLDSILKFGTKQEIYERYMKMGNMYHKMNQV
GESIKYFNLAIKLSKKL
>Mature_417_residues
MEILSVGQKIKRARVYKGYTLKELCGDIISVSKMSCIENDKIRPDDEILKIISEELEIDIKYLKAGVKEQLLDNIDKLKD
NKNSSDYEKILEYNLKYAEEYKYYHIAFYIIHMLFNYYLENSEIEKLQLIISKYYDYWLKSGIDDNKIIYYMDIAKFFFE
TKEYIEAASYYRSIRKIAHEKNNYILLSEATYDEAACYIKIKEFDKAYEIAVSLIDLIDFLDNNIKKAEVYKILAILSLR
LDRKKFENYEEKSYVLYGNDLIHKADATFKYATAMFDIGEKDKGISYINKALDLYPKNNTRAFVSFMLDTMKVLLKNDVL
YRAQEISDEILNYAIKINNIRFIEKAYYYKAIILEKQGSLDTAEMYMNLSLDSILKFGTKQEIYERYMKMGNMYHKMNQV
GESIKYFNLAIKLSKKL

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49462; Mature: 49462

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILSVGQKIKRARVYKGYTLKELCGDIISVSKMSCIENDKIRPDDEILKIISEELEIDI
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KYLKAGVKEQLLDNIDKLKDNKNSSDYEKILEYNLKYAEEYKYYHIAFYIIHMLFNYYLE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
NSEIEKLQLIISKYYDYWLKSGIDDNKIIYYMDIAKFFFETKEYIEAASYYRSIRKIAHE
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KNNYILLSEATYDEAACYIKIKEFDKAYEIAVSLIDLIDFLDNNIKKAEVYKILAILSLR
CCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LDRKKFENYEEKSYVLYGNDLIHKADATFKYATAMFDIGEKDKGISYINKALDLYPKNNT
HHHHHHCCCCCCEEEEECCCHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCH
RAFVSFMLDTMKVLLKNDVLYRAQEISDEILNYAIKINNIRFIEKAYYYKAIILEKQGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEHHHHHHHEEEEEECCCCC
DTAEMYMNLSLDSILKFGTKQEIYERYMKMGNMYHKMNQVGESIKYFNLAIKLSKKL
CHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
>Mature Secondary Structure
MEILSVGQKIKRARVYKGYTLKELCGDIISVSKMSCIENDKIRPDDEILKIISEELEIDI
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KYLKAGVKEQLLDNIDKLKDNKNSSDYEKILEYNLKYAEEYKYYHIAFYIIHMLFNYYLE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
NSEIEKLQLIISKYYDYWLKSGIDDNKIIYYMDIAKFFFETKEYIEAASYYRSIRKIAHE
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KNNYILLSEATYDEAACYIKIKEFDKAYEIAVSLIDLIDFLDNNIKKAEVYKILAILSLR
CCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LDRKKFENYEEKSYVLYGNDLIHKADATFKYATAMFDIGEKDKGISYINKALDLYPKNNT
HHHHHHCCCCCCEEEEECCCHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCH
RAFVSFMLDTMKVLLKNDVLYRAQEISDEILNYAIKINNIRFIEKAYYYKAIILEKQGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEHHHHHHHEEEEEECCCCC
DTAEMYMNLSLDSILKFGTKQEIYERYMKMGNMYHKMNQVGESIKYFNLAIKLSKKL
CHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA