| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153936765
Identifier: 153936765
GI number: 153936765
Start: 507165
End: 507851
Strand: Direct
Name: 153936765
Synonym: CLC_0504
Alternate gene names: NA
Gene position: 507165-507851 (Clockwise)
Preceding gene: 153935984
Following gene: 153936822
Centisome position: 13.49
GC content: 27.8
Gene sequence:
>687_bases ATGATGCCAAAGCAAAAGGAGTTATGGATACCTAATGATGAGGTAGCAGAAAAAATAATATTAATACAAATAGAATGTTC TTTAAACGAAAACTATGAAAAATTAGAAAACAATACTATGTTTATTGAATCAATGAAAAGAAAAGATAATTCACCAGTAT TAGAAGTAGCACCTAAATTGAAAAATACTAATATATTAGGGTTATATGAAAGAATGTTACCACTTACTAAGGTGGATTTA ATGTATGCTTCAGTTTATTCTAAAACAGGTGGGGTACTTAATTTATTTAATGAAAAAATTTCTGAAAACATGGATATACA ATTTAAAGAATTAAGTAGTAAATCTAGAAATACAAATGAAGCTATAAAGAAATGGAAAGGCGAACCTTCAGAATTATGGA GCGGATTAACACCATCACAAATATGGGCTGGTGGAGGAAAGGTAGAAAAAGCTTTATTAATGGATTTCTTGAACAAGCTT ACGGAATTAATGAATGGAAAGCAGTTTACTACAAAAGGAGCAGCTTTTATGAATTGTATAGATGTATTAAGAACTTGGCA ACTTAATAAAAATGATATTTGTGAAGGTAAAACTCCTATGGAAGCTATAATAGAAGAAAGAAATCTTATATTGAAAGATA AGATAGATTTTATAAAAGAAAACAATATAGAATGTGACTTTGTATAA
Upstream 100 bases:
>100_bases ATAAAGAAGGAGAAAAGCTGCTTAAAAGAAGTTTAAAATTAAACCCGCATTATAAGGAAGCAAATGATTTATTAGAAAAA TTAAGAGGTGAAAAATAGTC
Downstream 100 bases:
>100_bases TAACTTAATGTAAATTATAACCTGCTAATGGTTAATTACCAATGGTAGGTTTTAATTTTTTATTTATAGAAAATATATAT AAATAAAAAATTATTTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSPVLEVAPKLKNTNILGLYERMLPLTKVDL MYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNEAIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKL TELMNGKQFTTKGAAFMNCIDVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFV
Sequences:
>Translated_228_residues MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSPVLEVAPKLKNTNILGLYERMLPLTKVDL MYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNEAIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKL TELMNGKQFTTKGAAFMNCIDVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFV >Mature_228_residues MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSPVLEVAPKLKNTNILGLYERMLPLTKVDL MYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNEAIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKL TELMNGKQFTTKGAAFMNCIDVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26236; Mature: 26236
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSPVLEVAPKL CCCCCCCCCCCCHHHCCEEEEEEEEECCCCCHHHHCCCHHHHHHHHCCCCCCCEEECCCC KNTNILGLYERMLPLTKVDLMYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNE CCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHCCCCCHHH AIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKLTELMNGKQFTTKGAAFMNCI HHHHHCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH DVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFV HHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEECCC >Mature Secondary Structure MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSPVLEVAPKL CCCCCCCCCCCCHHHCCEEEEEEEEECCCCCHHHHCCCHHHHHHHHCCCCCCCEEECCCC KNTNILGLYERMLPLTKVDLMYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNE CCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHCCCCCHHH AIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKLTELMNGKQFTTKGAAFMNCI HHHHHCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH DVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFV HHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA