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The map label for this gene is 153935984

Identifier: 153935984

GI number: 153935984

Start: 506512

End: 507162

Strand: Direct

Name: 153935984

Synonym: CLC_0503

Alternate gene names: NA

Gene position: 506512-507162 (Clockwise)

Preceding gene: 153937371

Following gene: 153936765

Centisome position: 13.47

GC content: 22.73

Gene sequence:

>651_bases
ATGAAAAAAAACTTAAGTAGGAAGTATGAAAAACTTCTTTTAGATAATTATAGACGAAATATAGATAATTCTAATTATAA
AGATTTAATATTGGAAGGAATAAGTAGTCATAAAGCTATACATAGATATCTAAAAGATTACATAAAAAATAATAAGGAAG
TCTTGGATTTAAATTGGGGAAAGCAAATGCTTTTGTTTATAATTTCTTTTAATGAAAAGGATCTTGAACTAGCAGAGATT
TGTTATAAATCATTGAAGAAATATCCAGATAATTATTTTACAGAATCCGTAATGGCAGATATTAATTTAAGATTTTATGG
GAACTTGTTTAAAGCTAGAGATAAATATTTAAATGCTTTAAATTTATATGATAGAGATGCGCTTGTTTACTACAACTTAG
GACTAATATATTATTTATTAGGAATGTTTAAAAAGAGTATGGATTTTTATAATAAAAGTTTAAACTACATAAATAAGATG
GATAATAAAGAATTTATAAAATCTAAATGCTTATATAACATAGCAGTTTGTGAGATTAATTATAATAATAATTATAAAGA
AGGAGAAAAGCTGCTTAAAAGAAGTTTAAAATTAAACCCGCATTATAAGGAAGCAAATGATTTATTAGAAAAATTAAGAG
GTGAAAAATAG

Upstream 100 bases:

>100_bases
ATAATTACAAAAATATATAAAATTTTGCATGTAAATGAAAAAATATTGTATACTTATATGTGTTATATTATTTATTTTGA
AGGGAGAATAATGGGCAGGA

Downstream 100 bases:

>100_bases
TCATGATGCCAAAGCAAAAGGAGTTATGGATACCTAATGATGAGGTAGCAGAAAAAATAATATTAATACAAATAGAATGT
TCTTTAAACGAAAACTATGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKKNLSRKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWGKQMLLFIISFNEKDLELAEI
CYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNALNLYDRDALVYYNLGLIYYLLGMFKKSMDFYNKSLNYINKM
DNKEFIKSKCLYNIAVCEINYNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK

Sequences:

>Translated_216_residues
MKKNLSRKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWGKQMLLFIISFNEKDLELAEI
CYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNALNLYDRDALVYYNLGLIYYLLGMFKKSMDFYNKSLNYINKM
DNKEFIKSKCLYNIAVCEINYNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK
>Mature_216_residues
MKKNLSRKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWGKQMLLFIISFNEKDLELAEI
CYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNALNLYDRDALVYYNLGLIYYLLGMFKKSMDFYNKSLNYINKM
DNKEFIKSKCLYNIAVCEINYNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26017; Mature: 26017

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLSRKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWG
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KQMLLFIISFNEKDLELAEICYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNAL
CEEEHEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLYDRDALVYYNLGLIYYLLGMFKKSMDFYNKSLNYINKMDNKEFIKSKCLYNIAVCEIN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEEEE
YNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKNLSRKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWG
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KQMLLFIISFNEKDLELAEICYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNAL
CEEEHEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLYDRDALVYYNLGLIYYLLGMFKKSMDFYNKSLNYINKMDNKEFIKSKCLYNIAVCEIN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEEEE
YNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA