| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is manA [H]
Identifier: 153936592
GI number: 153936592
Start: 470547
End: 471527
Strand: Direct
Name: manA [H]
Synonym: CLC_0468
Alternate gene names: 153936592
Gene position: 470547-471527 (Clockwise)
Preceding gene: 153935762
Following gene: 153935517
Centisome position: 12.51
GC content: 27.32
Gene sequence:
>981_bases ATGTACCCTTTAAAATTTGAAAACATATATTTAAATAAGGTGTGGGGAGGAAGAGGCTTAAAAAAATTTAGAGATAATCT TCCTAAAGGTGATATAGGTGAAAGTTGGGATATAGCATTTCACCAAGATTTAATAAGTGTAATCAAAAATGGGAAACTTA AGGGGAAGACATTAAAAGATGCTATAGAATTATATAAAAATAAATTAATGGGAGACTGCATATTTGATAAATATAAAGAT TTTCCATTACTTTTAAAAATAATAAGTGCAGAAAAAAAATTGTCCATACAGGTACACCCAGGTGAAAAAGACTTTTTAGA TTTAAAGGAAAGCCCTAAAAAAGAAGCCTGGTATGTTATGGAAGCTAAAGTGGGTTCCTATATAATTTTAGGTAGTAAAA TAAAAGATAAAACTGTACTTAAACAGGTTATAGACGATGGCACAGTTGAAGATTATTTATATAAAGTACCAGTAAAGAAG GGGGATATATTTTATATAGATAGTGGAATGATTCATGCTATAGGTAAAGGAGTTACATTAATTGAAATTCAACAGAACAG CGATACAACTTATAGATTATATGATTATAATAGAGGAAGAAAACTAGATTTAGAAAAAGGAATGAATTGTGTAAATTTAG ATATTAAACCTAATAAAAAATCAGGCTTAAAAGTGCAATTGAAAAATTGCAATAAAACTTATTGCTTTTTGTCAGAGGCT TTTGCTATGGAAAAATATGAAGTATATTATTTTTTAAAAGAAAAAAGTGATAAAGAAAGATTTTTTATTTTTACCTGTGT AGATGGACAAGGACAAATTAATTATGGTGAAGGACGACAAAATCTAAGTAGGGGAGATAGTATACTCATACCTGCTTATA TGGGAGATTATACATTAAGAGGTAACATGAACTTATTGAAATTTTATATACCAGATATAGAAAAGTCCATTAATAGTATT GTAAATATAATAAAATGTTAA
Upstream 100 bases:
>100_bases AGGTGTGGGACAATAATCATTTATATATTTTTTATTTTAGAATATATATTAAATGTATCTAATATATATTAAGTGAATTA ATTTATATTTAAGGAGAAAA
Downstream 100 bases:
>100_bases ATAGATTTTATGTTATTAGATTAAAACAATAAAATTAAAAGAAGTATGTATTGTATAAAGAGAAATTTATAAATGATGTA TAAAATAGGTTTGATTTTAG
Product: mannose-6-phosphate isomerase, class I
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MYPLKFENIYLNKVWGGRGLKKFRDNLPKGDIGESWDIAFHQDLISVIKNGKLKGKTLKDAIELYKNKLMGDCIFDKYKD FPLLLKIISAEKKLSIQVHPGEKDFLDLKESPKKEAWYVMEAKVGSYIILGSKIKDKTVLKQVIDDGTVEDYLYKVPVKK GDIFYIDSGMIHAIGKGVTLIEIQQNSDTTYRLYDYNRGRKLDLEKGMNCVNLDIKPNKKSGLKVQLKNCNKTYCFLSEA FAMEKYEVYYFLKEKSDKERFFIFTCVDGQGQINYGEGRQNLSRGDSILIPAYMGDYTLRGNMNLLKFYIPDIEKSINSI VNIIKC
Sequences:
>Translated_326_residues MYPLKFENIYLNKVWGGRGLKKFRDNLPKGDIGESWDIAFHQDLISVIKNGKLKGKTLKDAIELYKNKLMGDCIFDKYKD FPLLLKIISAEKKLSIQVHPGEKDFLDLKESPKKEAWYVMEAKVGSYIILGSKIKDKTVLKQVIDDGTVEDYLYKVPVKK GDIFYIDSGMIHAIGKGVTLIEIQQNSDTTYRLYDYNRGRKLDLEKGMNCVNLDIKPNKKSGLKVQLKNCNKTYCFLSEA FAMEKYEVYYFLKEKSDKERFFIFTCVDGQGQINYGEGRQNLSRGDSILIPAYMGDYTLRGNMNLLKFYIPDIEKSINSI VNIIKC >Mature_326_residues MYPLKFENIYLNKVWGGRGLKKFRDNLPKGDIGESWDIAFHQDLISVIKNGKLKGKTLKDAIELYKNKLMGDCIFDKYKD FPLLLKIISAEKKLSIQVHPGEKDFLDLKESPKKEAWYVMEAKVGSYIILGSKIKDKTVLKQVIDDGTVEDYLYKVPVKK GDIFYIDSGMIHAIGKGVTLIEIQQNSDTTYRLYDYNRGRKLDLEKGMNCVNLDIKPNKKSGLKVQLKNCNKTYCFLSEA FAMEKYEVYYFLKEKSDKERFFIFTCVDGQGQINYGEGRQNLSRGDSILIPAYMGDYTLRGNMNLLKFYIPDIEKSINSI VNIIKC
Specific function: Involved In The Conversion Of Glucose To Gdp-L-Fucose, Which Can Be Converted To L-Fucose, A Capsular Polysaccharide. [C]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR014628 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 37578; Mature: 37578
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPLKFENIYLNKVWGGRGLKKFRDNLPKGDIGESWDIAFHQDLISVIKNGKLKGKTLKD CCCEEECEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH AIELYKNKLMGDCIFDKYKDFPLLLKIISAEKKLSIQVHPGEKDFLDLKESPKKEAWYVM HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE EAKVGSYIILGSKIKDKTVLKQVIDDGTVEDYLYKVPVKKGDIFYIDSGMIHAIGKGVTL EECCCCEEEECCCCCHHHHHHHHHCCCCHHHEEEECCCCCCCEEEECCCEEEECCCCEEE IEIQQNSDTTYRLYDYNRGRKLDLEKGMNCVNLDIKPNKKSGLKVQLKNCNKTYCFLSEA EEEECCCCCEEEEEECCCCCEEEHHHCCCEEEEEECCCCCCCCEEEEECCCCEEEEEHHH FAMEKYEVYYFLKEKSDKERFFIFTCVDGQGQINYGEGRQNLSRGDSILIPAYMGDYTLR HCCEEEEEEEEEECCCCCCEEEEEEEECCCCEEECCCCCCHHCCCCCEEEEEEECCEEEE GNMNLLKFYIPDIEKSINSIVNIIKC CCCEEEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure MYPLKFENIYLNKVWGGRGLKKFRDNLPKGDIGESWDIAFHQDLISVIKNGKLKGKTLKD CCCEEECEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH AIELYKNKLMGDCIFDKYKDFPLLLKIISAEKKLSIQVHPGEKDFLDLKESPKKEAWYVM HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE EAKVGSYIILGSKIKDKTVLKQVIDDGTVEDYLYKVPVKKGDIFYIDSGMIHAIGKGVTL EECCCCEEEECCCCCHHHHHHHHHCCCCHHHEEEECCCCCCCEEEECCCEEEECCCCEEE IEIQQNSDTTYRLYDYNRGRKLDLEKGMNCVNLDIKPNKKSGLKVQLKNCNKTYCFLSEA EEEECCCCCEEEEEECCCCCEEEHHHCCCEEEEEECCCCCCCCEEEEECCCCEEEEEHHH FAMEKYEVYYFLKEKSDKERFFIFTCVDGQGQINYGEGRQNLSRGDSILIPAYMGDYTLR HCCEEEEEEEEEECCCCCCEEEEEEEECCCCEEECCCCCCHHCCCCCEEEEEEECCEEEE GNMNLLKFYIPDIEKSINSIVNIIKC CCCEEEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]