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The map label for this gene is 153935517

Identifier: 153935517

GI number: 153935517

Start: 471876

End: 472991

Strand: Direct

Name: 153935517

Synonym: CLC_0469

Alternate gene names: NA

Gene position: 471876-472991 (Clockwise)

Preceding gene: 153936592

Following gene: 153936387

Centisome position: 12.55

GC content: 26.52

Gene sequence:

>1116_bases
ATGTATAGAAAAAAACTAAACTTAAAAACTGTATGTGCTTTTATTCTTATATTATTTATTAATATATTACTTATTTCCTG
CAAGGGTGGAAGTAGCAATAAGGGTATCATAGTGGAAAAATGGGATAATTTTTATGAAGGGAATAACATACATTTTTATT
ATAGTGATGGCAAAAGTCCAAACTCTCAACAATTAAAATCCAAGTATTCTTTAGATAAACTTACATCAAAAGGAAAAGAT
GATTTAGATAAGGCTTTAGAGATAACTAGTTGGTTAAATAATAAATTGAAGTTTTCTAAAAACAGTATAAAGACAGAAGA
GGATACTTTAACTATATTAGAAAAATATAAAGAGGGAGAGACTGTTTCAGATAAAGAATTTAATGAGATTTTTACAGAGG
CTATTTCTTCTGTTGGAATATATTCAAGAATAGGAGAATTTAGAGTTAAGGACGCTCAGCATAGCAAGAAGAATGATTTT
TTCATGGTTTCAGAAATTTGGAGCGATAAATATAAAAAATGGATAATGATAGATGTGGTTAATTCCTGTTATATGTCCAA
AGCTGGAGTGCCATTAAGTGCTATAGAAATTTTAAATAATGGAATAAGTGGACTAGAAATAAATGAAGTTAAAGATAAAA
ATAAATATATTAAAAAAATGGAGAGATATTTTTATAGCTACACTATAGGTATCGACAATAATATTCATGATGGAGTTAAA
AGTAATTCATATATTACTTATATACAAAGTGGACAATTACCAGAATTGAAAACTATTAAAGGATATATTAAACCAACTAT
TTTTGTAAATAATGACTCTTTATTTACTATTTCACCTAAAATTGAGTATAAAGACTTACAAAATGATAAAAAGCCTACTC
TAATAATATCTAAAAAGAACATTGAAGGAAAAGAAGAAGAAACTCCAAGCTTTTATGTAGCTTCTTTTAAAGATAGTGTT
ATGGTTACGGAGTTTTATATAAGTGTTAATGGAGCAGATTTTGGCAAAGTAAATACTATTTTTGAATTGAAATTAAAAGA
AGGGCAAAACTCTATAAAGTTATCAGAAAATGGTAAGGATGCCGTAAGGGAAGTAATAGTGAATTATAAAAAGTAA

Upstream 100 bases:

>100_bases
TTGTGAATATTATATAAATAATAAAAATTTTAAATTAATACTAGATACTTAATATACGATAAACATATTAATATATAAAT
TGAGAAAAAGGGGAACTTAA

Downstream 100 bases:

>100_bases
TAAAGATTATTATTTTCTTATATGTTCATTAATATATTTGTATAAGTCATAAAAAATAGTATAATATAGAAGGTATTAAA
TAAAAAAGAGAGTGAGGAGT

Product: putative lipoprotein

Products: NA

Alternate protein names: Transglutaminase Domain Protein

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MYRKKLNLKTVCAFILILFINILLISCKGGSSNKGIIVEKWDNFYEGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKD
DLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDF
FMVSEIWSDKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINEVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKNIEGKEEETPSFYVASFKDSV
MVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKDAVREVIVNYKK

Sequences:

>Translated_371_residues
MYRKKLNLKTVCAFILILFINILLISCKGGSSNKGIIVEKWDNFYEGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKD
DLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDF
FMVSEIWSDKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINEVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKNIEGKEEETPSFYVASFKDSV
MVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKDAVREVIVNYKK
>Mature_371_residues
MYRKKLNLKTVCAFILILFINILLISCKGGSSNKGIIVEKWDNFYEGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKD
DLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDF
FMVSEIWSDKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINEVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKNIEGKEEETPSFYVASFKDSV
MVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKDAVREVIVNYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42562; Mature: 42562

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRKKLNLKTVCAFILILFINILLISCKGGSSNKGIIVEKWDNFYEGNNIHFYYSDGKSP
CCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCC
NSQQLKSKYSLDKLTSKGKDDLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCC
TVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDFFMVSEIWSDKYKKWIMIDVV
CCCCHHHHHHHHHHHHHCHHHHHHCCCEECCCCCCCCCCEEEEHHHHHHHCCEEEEEEEH
NSCYMSKAGVPLSAIEILNNGISGLEINEVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
HHHHHHCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKN
CCCEEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECCCEEHHHCCCCCCCEEEEEECC
IEGKEEETPSFYVASFKDSVMVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKD
CCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCHH
AVREVIVNYKK
HHHHHHHCCCC
>Mature Secondary Structure
MYRKKLNLKTVCAFILILFINILLISCKGGSSNKGIIVEKWDNFYEGNNIHFYYSDGKSP
CCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCC
NSQQLKSKYSLDKLTSKGKDDLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCC
TVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDFFMVSEIWSDKYKKWIMIDVV
CCCCHHHHHHHHHHHHHCHHHHHHCCCEECCCCCCCCCCEEEEHHHHHHHCCEEEEEEEH
NSCYMSKAGVPLSAIEILNNGISGLEINEVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
HHHHHHCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKN
CCCEEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECCCEEHHHCCCCCCCEEEEEECC
IEGKEEETPSFYVASFKDSVMVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKD
CCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCHH
AVREVIVNYKK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA