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The map label for this gene is 153936571

Identifier: 153936571

GI number: 153936571

Start: 3109734

End: 3110162

Strand: Direct

Name: 153936571

Synonym: CLC_2955

Alternate gene names: NA

Gene position: 3109734-3110162 (Clockwise)

Preceding gene: 153937801

Following gene: 153935027

Centisome position: 82.69

GC content: 29.37

Gene sequence:

>429_bases
ATGAAAGAAATAGGTTATATTAAATCAGTAAAAGATGGCTATGCTTCTGTTATATTTAAAAGAAAATCTGGTTGTGGAGA
TAACTGTGCCGGTTGCAAATCTAACTGTGGATCTAAATCTATAACTACAGATGTTAAAGATACGCTAGGAGTGTCTATAG
GAGATATGGTAGAAATAGATATGGCTACTAAATCATTTTTTGCTATGACATTTTGGACATATACTTTTCCATTAATAATG
CTAGTGATTGGTTTGGTTAGTTCTCTTTTAATTTTCAAAAATTTAGGCATTAAACAGTATGAATTACTTGCAACAGCAGT
TGGTCTGATATTTTTAAGTATTTCTTATTCTGTTTTAAGTCATATGGATAAAAAATTGGGTAAAAAACAAAGCTACACTC
TTAAAATGACACGAATACTTAGTAGATAA

Upstream 100 bases:

>100_bases
AAATATCTAACCTTATTTTACATATATATCATTTTACTTATTATTTAAATCTATGATATAATTAATAAACAACAAATGCC
ATTAATATAGGGGTGATTTT

Downstream 100 bases:

>100_bases
AATAAGGAAAGCGCATAGCACTTTCCTTATTTTATTAATCTTCTTTTTCTATTTTTTTTATTCCTAATTCTTCTAATTGA
TTTTCATCAACTACATTTGG

Product: sigma-E factor regulator

Products: NA

Alternate protein names: Positive Regulator Of Sigma(E) RseC/MucC Superfamily; Sigma-E Factor Regulator RseC/MucC Family

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKEIGYIKSVKDGYASVIFKRKSGCGDNCAGCKSNCGSKSITTDVKDTLGVSIGDMVEIDMATKSFFAMTFWTYTFPLIM
LVIGLVSSLLIFKNLGIKQYELLATAVGLIFLSISYSVLSHMDKKLGKKQSYTLKMTRILSR

Sequences:

>Translated_142_residues
MKEIGYIKSVKDGYASVIFKRKSGCGDNCAGCKSNCGSKSITTDVKDTLGVSIGDMVEIDMATKSFFAMTFWTYTFPLIM
LVIGLVSSLLIFKNLGIKQYELLATAVGLIFLSISYSVLSHMDKKLGKKQSYTLKMTRILSR
>Mature_142_residues
MKEIGYIKSVKDGYASVIFKRKSGCGDNCAGCKSNCGSKSITTDVKDTLGVSIGDMVEIDMATKSFFAMTFWTYTFPLIM
LVIGLVSSLLIFKNLGIKQYELLATAVGLIFLSISYSVLSHMDKKLGKKQSYTLKMTRILSR

Specific function: Unknown

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15666; Mature: 15666

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIGYIKSVKDGYASVIFKRKSGCGDNCAGCKSNCGSKSITTDVKDTLGVSIGDMVEID
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEHH
MATKSFFAMTFWTYTFPLIMLVIGLVSSLLIFKNLGIKQYELLATAVGLIFLSISYSVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
HMDKKLGKKQSYTLKMTRILSR
HHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKEIGYIKSVKDGYASVIFKRKSGCGDNCAGCKSNCGSKSITTDVKDTLGVSIGDMVEID
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEHH
MATKSFFAMTFWTYTFPLIMLVIGLVSSLLIFKNLGIKQYELLATAVGLIFLSISYSVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
HMDKKLGKKQSYTLKMTRILSR
HHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA