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The map label for this gene is 153936518

Identifier: 153936518

GI number: 153936518

Start: 593170

End: 593754

Strand: Direct

Name: 153936518

Synonym: CLC_0581

Alternate gene names: NA

Gene position: 593170-593754 (Clockwise)

Preceding gene: 153937508

Following gene: 153936001

Centisome position: 15.77

GC content: 25.64

Gene sequence:

>585_bases
ATGTATAAATTAAGTAGTTTATCAACAAATACCTTGAAAATATCAAAGGATGAAAAATTAGATTTAGAAATATTTTTACA
TAGTAAGAGAGTTGCTATATATGTAAAAAAAATTGCAGAGTTGATGAAGCTTAGTTCAAAACAAAGTAATGATTTAGTTC
TATTAGCATTAAATCATGATATAGGTAAGGCTAGAATACCCTCTAATATATTAAACAAGAAAGATAAATTAAGTCATAGT
GAATTCGAAATTGTAAAAAGACATACTCAGTTTGGTGCAGATATATTAATGGAATATGGATATTGTTTAGAAATTTGTAA
TGTTGTAAAATTTCATCATGAAAATTTTGATGGCAGTGGCTATTATGGATTAAAAGAAAAATCTATTCCTATGGCGGCTA
GAATACTTCGTATAGCAGATGTATACGAGGCTTTAACTACTGATAGATGCTATAGAAGGGCTTATACAAGAGAAGCAGCT
TTAGAGATTATGGTAAAAGAAGAAAATTTATATGATCCTGAAATATTGGAATTATTTATTAAAAAAATATATATAAATTC
TTTTAATTTACAATTATGTATATAG

Upstream 100 bases:

>100_bases
TATTTAGCTAGATATAGCCAACATAATTAGTTTAAATATGTAAACTAATTATGTTGGCTTTTGTTTTTATAAATTTATAG
GGATGGGGAGGAGCAATAAT

Downstream 100 bases:

>100_bases
CTAGTCAATAGCTATATATAACGAGGAGGAAATTTATGAAATTTAAAAATACTAAGGATAAAAATTTTATAAGTGTAAAA
AGTGTTATAAATATACAAAT

Product: HDIG domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHS
EFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSGYYGLKEKSIPMAARILRIADVYEALTTDRCYRRAYTREAA
LEIMVKEENLYDPEILELFIKKIYINSFNLQLCI

Sequences:

>Translated_194_residues
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHS
EFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSGYYGLKEKSIPMAARILRIADVYEALTTDRCYRRAYTREAA
LEIMVKEENLYDPEILELFIKKIYINSFNLQLCI
>Mature_194_residues
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHS
EFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSGYYGLKEKSIPMAARILRIADVYEALTTDRCYRRAYTREAA
LEIMVKEENLYDPEILELFIKKIYINSFNLQLCI

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22531; Mature: 22531

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHD
CCCCCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
IGKARIPSNILNKKDKLSHSEFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSG
CCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YYGLKEKSIPMAARILRIADVYEALTTDRCYRRAYTREAALEIMVKEENLYDPEILELFI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHH
KKIYINSFNLQLCI
HHHHHCCCEEEEEC
>Mature Secondary Structure
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHD
CCCCCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
IGKARIPSNILNKKDKLSHSEFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSG
CCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YYGLKEKSIPMAARILRIADVYEALTTDRCYRRAYTREAALEIMVKEENLYDPEILELFI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHH
KKIYINSFNLQLCI
HHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]