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The map label for this gene is ykoG [H]

Identifier: 153936330

GI number: 153936330

Start: 2363800

End: 2364480

Strand: Reverse

Name: ykoG [H]

Synonym: CLC_2236

Alternate gene names: 153936330

Gene position: 2364480-2363800 (Counterclockwise)

Preceding gene: 153937006

Following gene: 153937053

Centisome position: 62.88

GC content: 30.1

Gene sequence:

>681_bases
ATGGTTAAGATTTTAATAGTTGAAGATGAAGAGAAATTATCAAGATTTATTGAGCTTGAGTTAAAACACGAAGGTTATGA
AATAGTAAAAGCAAATAATGGTAGAACGGGTCTTGAAATTGCAGAAAAAGATGAGGCTGATTTAGTTCTTCTTGATATAA
TGCTTCCAGAAATAAACGGTCTTGAAGTATTAAGAAGGCTTAGAAGAACTTCTGATATTCCAATTATAATGCTTACTGCA
AGGGATGCAGTTATGGATAAAGTATCAGGTCTTGATGCAGGAGCAGATGATTATATAACTAAGCCATTTGCAATAGAAGA
GTTACTTGCAAGAATAAGAACAGCCCTTAAAAAGAGAATAGTTACAGTGAAGAAAGATGAAGATATAATAAGATGTGGAT
TATTATCATTAGATAAAATTAGACATAAAGTAATGTATGACAGCACAGAGATAGAACTGACAAATAGAGAGTTTAATTTG
TTACAAATATTAATGGAAAACAAGAATATAGTGTTAACTAGAAGTATACTTATGGAAAAGGTATGTGGTTATGATTATCT
TGGAGAAACCAATGTTATAGATGTTTATATAAGATTTTTAAGAACAAAAATAGATGATGCTTTTAAGGCTAAAATAATAA
CTACAGTTCGTGGTGTGGGATACGTAATTAAAGATGAGTAG

Upstream 100 bases:

>100_bases
TATTCAAAAAGGGTTGATACAGATAAGGCTAATAAGATATTACAGAGTATTTCAAATCATGTAAAAATTATAAAAGAAAA
ATTTAAGAAGGCGGATAAGA

Downstream 100 bases:

>100_bases
AAAAAATAAAACGAAAAATGTCATATCTATTGCAATAAAATTAAACTCTGTTTTTGTAAGAAATTTATTTTTAAAGTTTC
TTATCCTTGATATATGCATA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKDEADLVLLDIMLPEINGLEVLRRLRRTSDIPIIMLTA
RDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRIVTVKKDEDIIRCGLLSLDKIRHKVMYDSTEIELTNREFNL
LQILMENKNIVLTRSILMEKVCGYDYLGETNVIDVYIRFLRTKIDDAFKAKIITTVRGVGYVIKDE

Sequences:

>Translated_226_residues
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKDEADLVLLDIMLPEINGLEVLRRLRRTSDIPIIMLTA
RDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRIVTVKKDEDIIRCGLLSLDKIRHKVMYDSTEIELTNREFNL
LQILMENKNIVLTRSILMEKVCGYDYLGETNVIDVYIRFLRTKIDDAFKAKIITTVRGVGYVIKDE
>Mature_226_residues
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKDEADLVLLDIMLPEINGLEVLRRLRRTSDIPIIMLTA
RDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRIVTVKKDEDIIRCGLLSLDKIRHKVMYDSTEIELTNREFNL
LQILMENKNIVLTRSILMEKVCGYDYLGETNVIDVYIRFLRTKIDDAFKAKIITTVRGVGYVIKDE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=40, Blast_Score=181, Evalue=3e-47,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=40.1785714285714, Blast_Score=171, Evalue=3e-44,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=36.9369369369369, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=36.036036036036, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=38.5650224215247, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=34.8017621145374, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=31.25, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=32.7433628318584, Blast_Score=123, Evalue=9e-30,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=34.061135371179, Blast_Score=123, Evalue=9e-30,
Organism=Escherichia coli, GI1790860, Length=229, Percent_Identity=32.7510917030568, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=36.036036036036, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=32.3008849557522, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=32.7433628318584, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=31.3559322033898, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788550, Length=125, Percent_Identity=36.8, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790437, Length=116, Percent_Identity=32.7586206896552, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788905, Length=118, Percent_Identity=29.6610169491525, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25972; Mature: 25972

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKDEADLVLLDIMLPEING
CEEEEEECCHHHHHHHEEEEECCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCH
LEVLRRLRRTSDIPIIMLTARDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRI
HHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHE
VTVKKDEDIIRCGLLSLDKIRHKVMYDSTEIELTNREFNLLQILMENKNIVLTRSILMEK
EEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHEECCCCCEEEEHHHHHHH
VCGYDYLGETNVIDVYIRFLRTKIDDAFKAKIITTVRGVGYVIKDE
HCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCEEEEECC
>Mature Secondary Structure
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKDEADLVLLDIMLPEING
CEEEEEECCHHHHHHHEEEEECCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCH
LEVLRRLRRTSDIPIIMLTARDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRI
HHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHE
VTVKKDEDIIRCGLLSLDKIRHKVMYDSTEIELTNREFNLLQILMENKNIVLTRSILMEK
EEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHEECCCCCEEEEHHHHHHH
VCGYDYLGETNVIDVYIRFLRTKIDDAFKAKIITTVRGVGYVIKDE
HCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]