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The map label for this gene is xylR [C]

Identifier: 153935780

GI number: 153935780

Start: 355255

End: 356223

Strand: Reverse

Name: xylR [C]

Synonym: CLC_0367

Alternate gene names: 153935780

Gene position: 356223-355255 (Counterclockwise)

Preceding gene: 153935919

Following gene: 153935592

Centisome position: 9.47

GC content: 33.02

Gene sequence:

>969_bases
ATGGTTAAATATAGTGATTCTTCTTGGAGTGCTTTAGCAGATAAATATAATCTTGTTAAAAGACCTTATGGTAAAGGGCA
GATTTATGATTTCCCTCCTCATTGGTCAAATGGATGGATTGCAGAAGTAAACCCTGCTAAAGGATTATTTGTTTCAAGTG
CTTGGTTTACTCCAAGTGAGCAAATAGTATATACAATAAATTCTAGTAATCCTTTTATGATGCTTTTTTGTATTGACTGC
GGAGAAATAGTCTATTCGCAGCAAGGAAAGAAGAAGCAAGCTTTATTCCCTATCACTCATCTAATTATTAATCCCCAAAA
ACAATTTACCTTTACTTTCTTTAAAGACGTACATTATTGTTTTACCAGTATTTTGATTTTTGATGACTTTATAAAACCTT
TTCTCAAAGAGCGTACCAATGCACCTAGAATTAGTGTGGAGGATGCGAAACTTTGGAAAACACAACATTACAACACGCCG
GATATAATGCTTATTTTTGAACAAATTAGATGGGCTGTACGAAATACAGACATGCCTTTACTTTCCTTTGAGGGTATGAC
TTTGCATTTATTATCTTCAATCACTAGAAATTTCCCTGATATACCTAAAAGAAGAAGCAACCGCCGTCACTATGTTACTT
GGGAAAATGAGCAAAAAATTTATAAAGTTAAAAATAAGATTGATGAAGATATTTTAAATCTTCCGGATACAATTGAACTA
TGCAGAATAGCTGGAATGAGCGAAAGTAAACTTCGCCAATCTTTTAAAAACCATTATGGAATTCCTCTTTATAGATATAT
TAGAATAGAAACCATGAAAAGAGCCATGCAGCTCTTATCTGCTGACCATCTAAGTATTCGTAACATATCTGAACTGTGTG
GCTACAAAAATCCAGCCAAATTTGCTGCTGCCTTTAAAAATATCCATGGAATTACTCCTAGTGATTTTAGAAAATCTTTT
AATTTATAG

Upstream 100 bases:

>100_bases
AATTAAAATAAAATGGATTATATTTTAATTGAAAATTCTTCTCAAATAATGCTATAATTTTATTACTTTAAATCAAAGAA
AAAAGAGGTGTAAAAGTTTT

Downstream 100 bases:

>100_bases
GGTCTGCCGCACTAAAAAAATTAGTGCGATAGTTTTTTGCCTAGTAAAAAAACTTAATATCAAAAGCTTATTAAAGTGCT
CCATTTTTTTATTATTGAGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MVKYSDSSWSALADKYNLVKRPYGKGQIYDFPPHWSNGWIAEVNPAKGLFVSSAWFTPSEQIVYTINSSNPFMMLFCIDC
GEIVYSQQGKKKQALFPITHLIINPQKQFTFTFFKDVHYCFTSILIFDDFIKPFLKERTNAPRISVEDAKLWKTQHYNTP
DIMLIFEQIRWAVRNTDMPLLSFEGMTLHLLSSITRNFPDIPKRRSNRRHYVTWENEQKIYKVKNKIDEDILNLPDTIEL
CRIAGMSESKLRQSFKNHYGIPLYRYIRIETMKRAMQLLSADHLSIRNISELCGYKNPAKFAAAFKNIHGITPSDFRKSF
NL

Sequences:

>Translated_322_residues
MVKYSDSSWSALADKYNLVKRPYGKGQIYDFPPHWSNGWIAEVNPAKGLFVSSAWFTPSEQIVYTINSSNPFMMLFCIDC
GEIVYSQQGKKKQALFPITHLIINPQKQFTFTFFKDVHYCFTSILIFDDFIKPFLKERTNAPRISVEDAKLWKTQHYNTP
DIMLIFEQIRWAVRNTDMPLLSFEGMTLHLLSSITRNFPDIPKRRSNRRHYVTWENEQKIYKVKNKIDEDILNLPDTIEL
CRIAGMSESKLRQSFKNHYGIPLYRYIRIETMKRAMQLLSADHLSIRNISELCGYKNPAKFAAAFKNIHGITPSDFRKSF
NL
>Mature_322_residues
MVKYSDSSWSALADKYNLVKRPYGKGQIYDFPPHWSNGWIAEVNPAKGLFVSSAWFTPSEQIVYTINSSNPFMMLFCIDC
GEIVYSQQGKKKQALFPITHLIINPQKQFTFTFFKDVHYCFTSILIFDDFIKPFLKERTNAPRISVEDAKLWKTQHYNTP
DIMLIFEQIRWAVRNTDMPLLSFEGMTLHLLSSITRNFPDIPKRRSNRRHYVTWENEQKIYKVKNKIDEDILNLPDTIEL
CRIAGMSESKLRQSFKNHYGIPLYRYIRIETMKRAMQLLSADHLSIRNISELCGYKNPAKFAAAFKNIHGITPSDFRKSF
NL

Specific function: Regulatory Protein For The Xylbafghr Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37739; Mature: 37739

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKYSDSSWSALADKYNLVKRPYGKGQIYDFPPHWSNGWIAEVNPAKGLFVSSAWFTPSE
CCEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEECCCCCCC
QIVYTINSSNPFMMLFCIDCGEIVYSQQGKKKQALFPITHLIINPQKQFTFTFFKDVHYC
CEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCHHHHHHHHEECCCHHEEHHHHHHHHHH
FTSILIFDDFIKPFLKERTNAPRISVEDAKLWKTQHYNTPDIMLIFEQIRWAVRNTDMPL
HHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCE
LSFEGMTLHLLSSITRNFPDIPKRRSNRRHYVTWENEQKIYKVKNKIDEDILNLPDTIEL
EEECCHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHH
CRIAGMSESKLRQSFKNHYGIPLYRYIRIETMKRAMQLLSADHLSIRNISELCGYKNPAK
HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHH
FAAAFKNIHGITPSDFRKSFNL
HHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MVKYSDSSWSALADKYNLVKRPYGKGQIYDFPPHWSNGWIAEVNPAKGLFVSSAWFTPSE
CCEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEECCCCCCC
QIVYTINSSNPFMMLFCIDCGEIVYSQQGKKKQALFPITHLIINPQKQFTFTFFKDVHYC
CEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCHHHHHHHHEECCCHHEEHHHHHHHHHH
FTSILIFDDFIKPFLKERTNAPRISVEDAKLWKTQHYNTPDIMLIFEQIRWAVRNTDMPL
HHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCE
LSFEGMTLHLLSSITRNFPDIPKRRSNRRHYVTWENEQKIYKVKNKIDEDILNLPDTIEL
EEECCHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHH
CRIAGMSESKLRQSFKNHYGIPLYRYIRIETMKRAMQLLSADHLSIRNISELCGYKNPAK
HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHH
FAAAFKNIHGITPSDFRKSFNL
HHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA