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The map label for this gene is ygjI [C]

Identifier: 153935063

GI number: 153935063

Start: 389485

End: 390891

Strand: Direct

Name: ygjI [C]

Synonym: CLC_0401

Alternate gene names: 153935063

Gene position: 389485-390891 (Clockwise)

Preceding gene: 153935004

Following gene: 153936720

Centisome position: 10.36

GC content: 31.63

Gene sequence:

>1407_bases
ATGAAAAAGAAAATAGGTCTATGGGACTTAGTTTTCATGAATGTATCAGCGCTTTTTGGAATTAGATGGATAGCAAAATC
TACAGCATCTAGTTTTGGATTAGGTCTTGGTGCAATACCAGCTTGGGTATTATTTGCATTTATATTTTTCTTACCAAGTG
CGCTTATTTGTGCAGAACTTGCAGCTACTTATCCAAGAGATGGAGGGCTTTATGAATGGGTAAAGGAAGCCTATGGAGAA
AAATGGGGCTTTATGGTGTCTTGGTTAAATTGGACAGCTAAATTATTTTGGTATTCATCATTTTTAACATTCTTAATAGT
AAACGTTTCTTATACATTAGGGAAACCAGAGCTTGCAGGAAATAAGATGTTTGTACTTATATGTTCATTAGTTATATTCT
GGATACTTTCATTAATTAGTACTAAAGGTATGGCTTTTGCTAAAATATTTACTAATGTAGGGGCATTAGGTTCAACTGTG
CCAGCAATTCTTTTAATAGTAATGGCATTTGTATCTGTATTAGTATTTGGACATAAACCAGCATCAACTTATACCGTGGC
TACATTAACGCCAAAATTAAATATGGATACTTTAGCAGCAATTTCATCAGTTATGTTTGGACTTGCGGGAGCAGAAACTG
CTGCAAACTTTGTTACAGAAATAGATGATGCTAAAAAAACTTTCCCAAAGGCAATTTTAATATCAGCAGCTATAGTTGGA
GGACTTTATGTATTAGGTTCTATTGCTGTAACCATGATTCTTCCAGTAGATAAAATAACTGCATCTGAAGGTATATTAGC
AGCCTTAGGAACTGTTGCAGCTAATTTAGGAATAGGACCATGGTTTATAAGAATAATAGCTTTAGGTATTTCTTTATCAG
TATTTGGAGCTATAATACTTTATATAGCATCACCAATAAAAATGTTATTTGGTAGTGTTAAAAAAGGAATATTTACAGAG
AAGTTTACAAAGGTTAATGAACACAATATACCTGTACAAGCAGTTATACTACAAGCGGTTATAGTAAGTATAATATTATT
AACTACTACATTGCTACCATCCGTTGATGCAATATATAATGTGCTTGTTACAATGACAGCATTAACATCATTATTTCCAT
ATGTTTTATTATTCCGTTCATATATAAAATTAAGACAAGATAGACCAAATGAAGTAAGGCCATATGAAATGTCTAAAAAT
AATAGAAAAGCTATATTTATAGCTAATATGGTACTTATAATATCAGTAATAGGAATAGTTTTATCAGCAGCACCAGTTAT
GCCGACTTTAGCTGAAAATATAGTATATGAATTAGAAATGATAGGTGGAGCGATTTTAGTTATAGGCATAGGTTTATGGA
AATGGAATAATTTTGTTAAAAAAACAGGATTTAGAGAAGAAAAATAG

Upstream 100 bases:

>100_bases
AGGAAAAATTATGGTATTATCAAAATATACTGAAAATATTTTAAAATTTTTAATTTAAATATTTAACAAAACTAAAGAAT
TAACTTATGGAGGGATAGAC

Downstream 100 bases:

>100_bases
AAATATGAATAAAGAGGCTATCTAAAGGATAGTCTCTTTCACAAATAAATATTGATTTTGTTTCTCTTTTATTATATAGA
GAATAAAAAAATAAATATAA

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MKKKIGLWDLVFMNVSALFGIRWIAKSTASSFGLGLGAIPAWVLFAFIFFLPSALICAELAATYPRDGGLYEWVKEAYGE
KWGFMVSWLNWTAKLFWYSSFLTFLIVNVSYTLGKPELAGNKMFVLICSLVIFWILSLISTKGMAFAKIFTNVGALGSTV
PAILLIVMAFVSVLVFGHKPASTYTVATLTPKLNMDTLAAISSVMFGLAGAETAANFVTEIDDAKKTFPKAILISAAIVG
GLYVLGSIAVTMILPVDKITASEGILAALGTVAANLGIGPWFIRIIALGISLSVFGAIILYIASPIKMLFGSVKKGIFTE
KFTKVNEHNIPVQAVILQAVIVSIILLTTTLLPSVDAIYNVLVTMTALTSLFPYVLLFRSYIKLRQDRPNEVRPYEMSKN
NRKAIFIANMVLIISVIGIVLSAAPVMPTLAENIVYELEMIGGAILVIGIGLWKWNNFVKKTGFREEK

Sequences:

>Translated_468_residues
MKKKIGLWDLVFMNVSALFGIRWIAKSTASSFGLGLGAIPAWVLFAFIFFLPSALICAELAATYPRDGGLYEWVKEAYGE
KWGFMVSWLNWTAKLFWYSSFLTFLIVNVSYTLGKPELAGNKMFVLICSLVIFWILSLISTKGMAFAKIFTNVGALGSTV
PAILLIVMAFVSVLVFGHKPASTYTVATLTPKLNMDTLAAISSVMFGLAGAETAANFVTEIDDAKKTFPKAILISAAIVG
GLYVLGSIAVTMILPVDKITASEGILAALGTVAANLGIGPWFIRIIALGISLSVFGAIILYIASPIKMLFGSVKKGIFTE
KFTKVNEHNIPVQAVILQAVIVSIILLTTTLLPSVDAIYNVLVTMTALTSLFPYVLLFRSYIKLRQDRPNEVRPYEMSKN
NRKAIFIANMVLIISVIGIVLSAAPVMPTLAENIVYELEMIGGAILVIGIGLWKWNNFVKKTGFREEK
>Mature_468_residues
MKKKIGLWDLVFMNVSALFGIRWIAKSTASSFGLGLGAIPAWVLFAFIFFLPSALICAELAATYPRDGGLYEWVKEAYGE
KWGFMVSWLNWTAKLFWYSSFLTFLIVNVSYTLGKPELAGNKMFVLICSLVIFWILSLISTKGMAFAKIFTNVGALGSTV
PAILLIVMAFVSVLVFGHKPASTYTVATLTPKLNMDTLAAISSVMFGLAGAETAANFVTEIDDAKKTFPKAILISAAIVG
GLYVLGSIAVTMILPVDKITASEGILAALGTVAANLGIGPWFIRIIALGISLSVFGAIILYIASPIKMLFGSVKKGIFTE
KFTKVNEHNIPVQAVILQAVIVSIILLTTTLLPSVDAIYNVLVTMTALTSLFPYVLLFRSYIKLRQDRPNEVRPYEMSKN
NRKAIFIANMVLIISVIGIVLSAAPVMPTLAENIVYELEMIGGAILVIGIGLWKWNNFVKKTGFREEK

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994921, Length=471, Percent_Identity=25.9023354564756, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1787768, Length=385, Percent_Identity=25.1948051948052, Blast_Score=115, Evalue=9e-27,
Organism=Escherichia coli, GI87081798, Length=463, Percent_Identity=21.1663066954644, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87082380, Length=439, Percent_Identity=25.9681093394077, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50989; Mature: 50989

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIGLWDLVFMNVSALFGIRWIAKSTASSFGLGLGAIPAWVLFAFIFFLPSALICAEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AATYPRDGGLYEWVKEAYGEKWGFMVSWLNWTAKLFWYSSFLTFLIVNVSYTLGKPELAG
HHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NKMFVLICSLVIFWILSLISTKGMAFAKIFTNVGALGSTVPAILLIVMAFVSVLVFGHKP
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASTYTVATLTPKLNMDTLAAISSVMFGLAGAETAANFVTEIDDAKKTFPKAILISAAIVG
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLYVLGSIAVTMILPVDKITASEGILAALGTVAANLGIGPWFIRIIALGISLSVFGAIIL
HHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YIASPIKMLFGSVKKGIFTEKFTKVNEHNIPVQAVILQAVIVSIILLTTTLLPSVDAIYN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVTMTALTSLFPYVLLFRSYIKLRQDRPNEVRPYEMSKNNRKAIFIANMVLIISVIGIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
LSAAPVMPTLAENIVYELEMIGGAILVIGIGLWKWNNFVKKTGFREEK
HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKKIGLWDLVFMNVSALFGIRWIAKSTASSFGLGLGAIPAWVLFAFIFFLPSALICAEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AATYPRDGGLYEWVKEAYGEKWGFMVSWLNWTAKLFWYSSFLTFLIVNVSYTLGKPELAG
HHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NKMFVLICSLVIFWILSLISTKGMAFAKIFTNVGALGSTVPAILLIVMAFVSVLVFGHKP
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASTYTVATLTPKLNMDTLAAISSVMFGLAGAETAANFVTEIDDAKKTFPKAILISAAIVG
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLYVLGSIAVTMILPVDKITASEGILAALGTVAANLGIGPWFIRIIALGISLSVFGAIIL
HHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YIASPIKMLFGSVKKGIFTEKFTKVNEHNIPVQAVILQAVIVSIILLTTTLLPSVDAIYN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVTMTALTSLFPYVLLFRSYIKLRQDRPNEVRPYEMSKNNRKAIFIANMVLIISVIGIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
LSAAPVMPTLAENIVYELEMIGGAILVIGIGLWKWNNFVKKTGFREEK
HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8366052 [H]