| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153933690
Identifier: 153933690
GI number: 153933690
Start: 3113629
End: 3114498
Strand: Reverse
Name: 153933690
Synonym: CLB_2961
Alternate gene names: NA
Gene position: 3114498-3113629 (Counterclockwise)
Preceding gene: 153930866
Following gene: 153932785
Centisome position: 80.61
GC content: 29.43
Gene sequence:
>870_bases TTGCAAAAATTAATTATAAATACAGACAGAGGGCAGAGCATTACATTGGGTAATTCTCGCCCTTTTATTTTATCTAAAAT TGATAATACTGCTGGAGTAAAAACAAATATAATAACTACTAAAAGTCCTTACCAAGATGGAAAAAACTATCATGGGACAA CTTTAGAAGATAGAGTATTGCCTGTTACTGGTGCAATAATATCTACAAGTACAGAAGATCTATATAGAAAAAGAATGAAT TTATGTTCTATATTTAATCCTAAAGCAAAAATAAATATAACATATATAAATAATGCTGGAGAACATTCTATTGAATGTGT AGTACAAGATAGTCCAGTATTTAATAAAAAAACTGGACTTATGCAAGAGTTTTTAGTGCAATTGTATTGTCCAAGTCCAT TTTGGCAAGATATTTATGAAACCAAAGAAGAAGTGGCTCTATGGATAGGAGATTTTGAATTCATGTTGGAAATTCCAGAT GAAGGTATAGAAATGGGACACAGAGAGAGCAATTTAATAGTTAATATATTTAATGATGGAGATATTGAATGTGGTATGAG AATAGAATTCACAGCATTAGCAACAGTAGTTAATCCAAGCTTATTTGATATAAATACAAGAAAGTATATAAAAGTTAAAA GAAGCTTACAAGCAGGAGACAAGTTGATAATTAACACAAAGTTCGGAGATAAAACAGTAGAAATGATTAGGAGTAATGGA GAAAGACAAAATGTTTTTAACTGGATAGACCTAGATAGTGAATTTTTGCAATTAAATGTAGGAGATAATTTATTTCGCTA TGATGCAGAACAAGGAATTGATAATTTAGAAGTAGCTATATATTATAAAAAGAACTACTTAGGGGTGTAG
Upstream 100 bases:
>100_bases AGAGGTAAAAAGTAGAGGTAGAACATTCAGTGATGATATTAGAGAAGCCGAAAGTATGGCTAGAAGATTAACTTTTCAAA CGACATAAAGGAGTGAGAAT
Downstream 100 bases:
>100_bases TCTATGATAAGAATATTTGATAAAAACCTAAATTTTTTAGGTGAAATAGATAATTACGAAAATTTAATATATACTAGGAG ATTTAGTAAAATTGGAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage-Related Tail Protein; Phage-Related Protein; Tail Protein; Tail Component Family Protein
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MQKLIINTDRGQSITLGNSRPFILSKIDNTAGVKTNIITTKSPYQDGKNYHGTTLEDRVLPVTGAIISTSTEDLYRKRMN LCSIFNPKAKINITYINNAGEHSIECVVQDSPVFNKKTGLMQEFLVQLYCPSPFWQDIYETKEEVALWIGDFEFMLEIPD EGIEMGHRESNLIVNIFNDGDIECGMRIEFTALATVVNPSLFDINTRKYIKVKRSLQAGDKLIINTKFGDKTVEMIRSNG ERQNVFNWIDLDSEFLQLNVGDNLFRYDAEQGIDNLEVAIYYKKNYLGV
Sequences:
>Translated_289_residues MQKLIINTDRGQSITLGNSRPFILSKIDNTAGVKTNIITTKSPYQDGKNYHGTTLEDRVLPVTGAIISTSTEDLYRKRMN LCSIFNPKAKINITYINNAGEHSIECVVQDSPVFNKKTGLMQEFLVQLYCPSPFWQDIYETKEEVALWIGDFEFMLEIPD EGIEMGHRESNLIVNIFNDGDIECGMRIEFTALATVVNPSLFDINTRKYIKVKRSLQAGDKLIINTKFGDKTVEMIRSNG ERQNVFNWIDLDSEFLQLNVGDNLFRYDAEQGIDNLEVAIYYKKNYLGV >Mature_289_residues MQKLIINTDRGQSITLGNSRPFILSKIDNTAGVKTNIITTKSPYQDGKNYHGTTLEDRVLPVTGAIISTSTEDLYRKRMN LCSIFNPKAKINITYINNAGEHSIECVVQDSPVFNKKTGLMQEFLVQLYCPSPFWQDIYETKEEVALWIGDFEFMLEIPD EGIEMGHRESNLIVNIFNDGDIECGMRIEFTALATVVNPSLFDINTRKYIKVKRSLQAGDKLIINTKFGDKTVEMIRSNG ERQNVFNWIDLDSEFLQLNVGDNLFRYDAEQGIDNLEVAIYYKKNYLGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32980; Mature: 32980
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLIINTDRGQSITLGNSRPFILSKIDNTAGVKTNIITTKSPYQDGKNYHGTTLEDRVL CCEEEEECCCCCEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE PVTGAIISTSTEDLYRKRMNLCSIFNPKAKINITYINNAGEHSIECVVQDSPVFNKKTGL EEECEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCHHHH MQEFLVQLYCPSPFWQDIYETKEEVALWIGDFEFMLEIPDEGIEMGHRESNLIVNIFNDG HHHHHHHHCCCCHHHHHHHHCHHHEEEEEECEEEEEECCCCHHHCCCCCCCEEEEEECCC DIECGMRIEFTALATVVNPSLFDINTRKYIKVKRSLQAGDKLIINTKFGDKTVEMIRSNG CEEECCEEEEEEEEEHHCCCEEECCCHHEEEEEHHHCCCCEEEEEECCCHHHHHHHHCCC ERQNVFNWIDLDSEFLQLNVGDNLFRYDAEQGIDNLEVAIYYKKNYLGV CCCCCEEEEECCCEEEEEECCCCEEEECHHCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MQKLIINTDRGQSITLGNSRPFILSKIDNTAGVKTNIITTKSPYQDGKNYHGTTLEDRVL CCEEEEECCCCCEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE PVTGAIISTSTEDLYRKRMNLCSIFNPKAKINITYINNAGEHSIECVVQDSPVFNKKTGL EEECEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCHHHH MQEFLVQLYCPSPFWQDIYETKEEVALWIGDFEFMLEIPDEGIEMGHRESNLIVNIFNDG HHHHHHHHCCCCHHHHHHHHCHHHEEEEEECEEEEEECCCCHHHCCCCCCCEEEEEECCC DIECGMRIEFTALATVVNPSLFDINTRKYIKVKRSLQAGDKLIINTKFGDKTVEMIRSNG CEEECCEEEEEEEEEHHCCCEEECCCHHEEEEEHHHCCCCEEEEEECCCHHHHHHHHCCC ERQNVFNWIDLDSEFLQLNVGDNLFRYDAEQGIDNLEVAIYYKKNYLGV CCCCCEEEEECCCEEEEEECCCCEEEECHHCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA