| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153932785
Identifier: 153932785
GI number: 153932785
Start: 3112540
End: 3113625
Strand: Reverse
Name: 153932785
Synonym: CLB_2960
Alternate gene names: NA
Gene position: 3113625-3112540 (Counterclockwise)
Preceding gene: 153933690
Following gene: 153932427
Centisome position: 80.59
GC content: 26.15
Gene sequence:
>1086_bases ATGATAAGAATATTTGATAAAAACCTAAATTTTTTAGGTGAAATAGATAATTACGAAAATTTAATATATACTAGGAGATT TAGTAAAATTGGAGGTTTTGAACTACATATAAATATGAACAAAAATCATACTGATAAGCTACAAGATAGTAACATTATTA TGATTAATAATAATCCTAATAAATGTGGAATTATAATGCATAGAGAGAATTTACAAGATGAAGGTAATAGTTCAGAAACT TTAGTAATAAAAGGATTAACTCTTAGTAGTCTATTAAATAAAAGAGTTATTATTCCAGCAGTTGGGGAAGCTTATTCAAT TTCTATTGGAACTATTGAAAGCATAATGAAAGACTTTGTGAATAAAAATGCAGTAAATCCAGTAGATAAAGATAGAATTA TTGAAAATCTAATTATAGCTAAAAACAAAAATAGAGGGAAACAAGATAAATGGAGGGCTAAATATAATGAAAATCTTTCT GATAAGTTAACCGAAATAGGCGAGTATGGGAATTTAGGTTATGAGGTGTTATTTGATTACCACGAAAGAAAACTTATATT TGATGTTATAGAAGGTAGAAATCTAACAGATGGCCAAGAAATATTACCACCAGTTATATTTTCAACTAAATATGATAATT TGAATAAAAAGCATTTTATAGAAAGTACTCTTAATTATAAAAATGTAGCGTATTGTGGTGGAAAAGGATTAGATGAAGAT AGATTAATACAACAGGTGGGGAATGCAAAAGGAATAGATAGAATAGAAACTTATTTTGAATGTAGTAATTTAGAAACTAT AGAAGATTTAAAAACAGAGGGAAAGCAAAAATTAGAGGATTATAACAAGATATATTCATTTGAAACTGGTATAAATCCAT TCAAACCTTTTAAATATGGACAAGATTATGATTTAGGGGACATAGTAACACTCCAGGATAAAAAAATGGGGATTACTATG AATGCAAGAATAGTTGAAATTAAAGAAATATATGGCGATATGTTTAACATTGAAATTATATTTGGTACTAACATTCCTAA TTTTTTAGATAATATAAGAAAAGAAATTAAAAGGGTGGTGAGATAA
Upstream 100 bases:
>100_bases AAATGTAGGAGATAATTTATTTCGCTATGATGCAGAACAAGGAATTGATAATTTAGAAGTAGCTATATATTATAAAAAGA ACTACTTAGGGGTGTAGTCT
Downstream 100 bases:
>100_bases TGGAAAAAAGCAGTTTTTTTAACTCTATAAATCATGACAGAAGATATAAAGCTGAGGAATTTGCGGAATATTTTGCAAGT TTTATTGGAGATGGTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Minor Protein N- Region
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MIRIFDKNLNFLGEIDNYENLIYTRRFSKIGGFELHINMNKNHTDKLQDSNIIMINNNPNKCGIIMHRENLQDEGNSSET LVIKGLTLSSLLNKRVIIPAVGEAYSISIGTIESIMKDFVNKNAVNPVDKDRIIENLIIAKNKNRGKQDKWRAKYNENLS DKLTEIGEYGNLGYEVLFDYHERKLIFDVIEGRNLTDGQEILPPVIFSTKYDNLNKKHFIESTLNYKNVAYCGGKGLDED RLIQQVGNAKGIDRIETYFECSNLETIEDLKTEGKQKLEDYNKIYSFETGINPFKPFKYGQDYDLGDIVTLQDKKMGITM NARIVEIKEIYGDMFNIEIIFGTNIPNFLDNIRKEIKRVVR
Sequences:
>Translated_361_residues MIRIFDKNLNFLGEIDNYENLIYTRRFSKIGGFELHINMNKNHTDKLQDSNIIMINNNPNKCGIIMHRENLQDEGNSSET LVIKGLTLSSLLNKRVIIPAVGEAYSISIGTIESIMKDFVNKNAVNPVDKDRIIENLIIAKNKNRGKQDKWRAKYNENLS DKLTEIGEYGNLGYEVLFDYHERKLIFDVIEGRNLTDGQEILPPVIFSTKYDNLNKKHFIESTLNYKNVAYCGGKGLDED RLIQQVGNAKGIDRIETYFECSNLETIEDLKTEGKQKLEDYNKIYSFETGINPFKPFKYGQDYDLGDIVTLQDKKMGITM NARIVEIKEIYGDMFNIEIIFGTNIPNFLDNIRKEIKRVVR >Mature_361_residues MIRIFDKNLNFLGEIDNYENLIYTRRFSKIGGFELHINMNKNHTDKLQDSNIIMINNNPNKCGIIMHRENLQDEGNSSET LVIKGLTLSSLLNKRVIIPAVGEAYSISIGTIESIMKDFVNKNAVNPVDKDRIIENLIIAKNKNRGKQDKWRAKYNENLS DKLTEIGEYGNLGYEVLFDYHERKLIFDVIEGRNLTDGQEILPPVIFSTKYDNLNKKHFIESTLNYKNVAYCGGKGLDED RLIQQVGNAKGIDRIETYFECSNLETIEDLKTEGKQKLEDYNKIYSFETGINPFKPFKYGQDYDLGDIVTLQDKKMGITM NARIVEIKEIYGDMFNIEIIFGTNIPNFLDNIRKEIKRVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41709; Mature: 41709
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIFDKNLNFLGEIDNYENLIYTRRFSKIGGFELHINMNKNHTDKLQDSNIIMINNNPN CEEEEECCCCEEECCCCHHHHHEEEHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCC KCGIIMHRENLQDEGNSSETLVIKGLTLSSLLNKRVIIPAVGEAYSISIGTIESIMKDFV EEEEEEECCCCCCCCCCCCEEEEECCCHHHHHCCEEEEEECCCEEEEEHHHHHHHHHHHH NKNAVNPVDKDRIIENLIIAKNKNRGKQDKWRAKYNENLSDKLTEIGEYGNLGYEVLFDY CCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEH HERKLIFDVIEGRNLTDGQEILPPVIFSTKYDNLNKKHFIESTLNYKNVAYCGGKGLDED HCCEEEEHHHCCCCCCCCHHHCCCCEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCHH RLIQQVGNAKGIDRIETYFECSNLETIEDLKTEGKQKLEDYNKIYSFETGINPFKPFKYG HHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC QDYDLGDIVTLQDKKMGITMNARIVEIKEIYGDMFNIEIIFGTNIPNFLDNIRKEIKRVV CCCCCCCEEEEECCCCCEEECCEEEEHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHC R C >Mature Secondary Structure MIRIFDKNLNFLGEIDNYENLIYTRRFSKIGGFELHINMNKNHTDKLQDSNIIMINNNPN CEEEEECCCCEEECCCCHHHHHEEEHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCC KCGIIMHRENLQDEGNSSETLVIKGLTLSSLLNKRVIIPAVGEAYSISIGTIESIMKDFV EEEEEEECCCCCCCCCCCCEEEEECCCHHHHHCCEEEEEECCCEEEEEHHHHHHHHHHHH NKNAVNPVDKDRIIENLIIAKNKNRGKQDKWRAKYNENLSDKLTEIGEYGNLGYEVLFDY CCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEH HERKLIFDVIEGRNLTDGQEILPPVIFSTKYDNLNKKHFIESTLNYKNVAYCGGKGLDED HCCEEEEHHHCCCCCCCCHHHCCCCEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCHH RLIQQVGNAKGIDRIETYFECSNLETIEDLKTEGKQKLEDYNKIYSFETGINPFKPFKYG HHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC QDYDLGDIVTLQDKKMGITMNARIVEIKEIYGDMFNIEIIFGTNIPNFLDNIRKEIKRVV CCCCCCCEEEEECCCCCEEECCEEEEHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA