Click here to switch to the map view.

The map label for this gene is 153930626

Identifier: 153930626

GI number: 153930626

Start: 5634

End: 6002

Strand: Direct

Name: 153930626

Synonym: YpsIP31758_A0046

Alternate gene names: NA

Gene position: 5634-6002 (Clockwise)

Preceding gene: NA

Following gene: 153930606

Centisome position: 9.6

GC content: 40.65

Gene sequence:

>369_bases
GTGTACAATCTTATCTTATTTACTAACATTCTTCGCATCTTAGAAGAACGAGGAATGACAAAAAGTGAATTACATGAAGT
TTCAGGTGTATCTATTTCATTTTTGTCTGATCTCACCAATGGTAAGGCGAATCCATCGTTAAAGGTCATGGAGGCTATTG
CTGATGCCTTAGATACTCCATTACCTATCCTTTTGGAGTCAACCGATCTTGATCAAGACTCTCTGGATGCGTTAGCCGGT
GGAAAAATGCCGAGGAGTCTTCCTGAAGGGTATGAACGGGTATCGGCTATTGTTACTGATCATCAGGCTTATATCATAAG
AAAATGGCATGAGGCCGCACAAAAGAAAATCGATACCAGAACCAGCTAA

Upstream 100 bases:

>100_bases
CCACTTGCTTACTGAAGAATGAGTTTAGCTAAACAATTTCCATAAATCAATAACTTTAGCGGCTAAAATTCATGCCGAAA
CCATAAGGCAACGGTAAACT

Downstream 100 bases:

>100_bases
ACGATAGCAAATTCAATATGTACCAGCTAAAGCCTCCAATAGGGAGGCTTTTTTATTATCATAAAACAAACAAAATATCC
GTTGTTCTTGCGCCAGCAAA

Product: conjugal transfer protein TrbA

Products: NA

Alternate protein names: TrbA Protein Of DNA Transfer System

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MYNLILFTNILRILEERGMTKSELHEVSGVSISFLSDLTNGKANPSLKVMEAIADALDTPLPILLESTDLDQDSLDALAG
GKMPRSLPEGYERVSAIVTDHQAYIIRKWHEAAQKKIDTRTS

Sequences:

>Translated_122_residues
MYNLILFTNILRILEERGMTKSELHEVSGVSISFLSDLTNGKANPSLKVMEAIADALDTPLPILLESTDLDQDSLDALAG
GKMPRSLPEGYERVSAIVTDHQAYIIRKWHEAAQKKIDTRTS
>Mature_122_residues
MYNLILFTNILRILEERGMTKSELHEVSGVSISFLSDLTNGKANPSLKVMEAIADALDTPLPILLESTDLDQDSLDALAG
GKMPRSLPEGYERVSAIVTDHQAYIIRKWHEAAQKKIDTRTS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13541; Mature: 13541

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNLILFTNILRILEERGMTKSELHEVSGVSISFLSDLTNGKANPSLKVMEAIADALDTP
CCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
LPILLESTDLDQDSLDALAGGKMPRSLPEGYERVSAIVTDHQAYIIRKWHEAAQKKIDTR
CCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TS
CC
>Mature Secondary Structure
MYNLILFTNILRILEERGMTKSELHEVSGVSISFLSDLTNGKANPSLKVMEAIADALDTP
CCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
LPILLESTDLDQDSLDALAGGKMPRSLPEGYERVSAIVTDHQAYIIRKWHEAAQKKIDTR
CCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA