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The map label for this gene is traI [H]

Identifier: 153930611

GI number: 153930611

Start: 47397

End: 50018

Strand: Reverse

Name: traI [H]

Synonym: YpsIP31758_A0026

Alternate gene names: 153930611

Gene position: 50018-47397 (Counterclockwise)

Preceding gene: 153930576

Following gene: 153930564

Centisome position: 85.24

GC content: 41.76

Gene sequence:

>2622_bases
GTGATCATTCGCCATATTCCGATGAAATCTGTCAAGCGAAGCAGCTATTCAGGTCTAACAAAATACATAACGAATGAGCA
AGGAAAGCAGGAAAGAGTTGGTGATATCAATATCACTAACTGTAATAGCGAGGATGTTGATTGGGCTATAAATGAGATTC
AGGCAACGCAGAAATTAAACACACGCGCGACCGGAGATAAAACTTATCATTTGTTTATTTCATTTCCGGCAGGTGAAAGC
CCTTCAGCAGATATTCTTAAAGATATTGAAGCCAGGGTTTGTAGTTCAATTGGCTATGGTGAGCATCAGCGTGTCAGCGC
TGTTCATCACGATACTGATAATCTTCATATCCACATATCTATTAATAAAATCCACCCATCAAAACATACATTACATGAGC
CTTATAGAGCCTATTCAACATTTGGTGATATCGCTGGAAAGTTAGAAATAGAACATGGCTTGCAGCAAACTAATCATACT
GCAAAGAAAGTTGGAGCAGAAAACCGCGCCCATGATATGGAGCATCACGCAGGGGTTGAAAGCTTGCTCAGTTGGGTTAA
GCGTGAATGTTTGGAATCTATACGCAATAGTAAAAGTTGGGGGGAGCTACACCAAGTAATTCAAAATAATGGGCTAGAAC
TGCGTGAGAGTGGTAATGGCTTGATCATAACTGACCAGCAAGGAATCGCTGTCAAAGCAAGCTCGGTATCCAGAGATATT
TCTAAAGGAAAATTAGAGGTAAAACTTGGTAAGTTTGAAAAGCCACAACCACAGAATAAAAGATCACCAAAAAACAACAT
TGGGCATAGTAAAAGGCCAAGGGTTGGAAAAGTAGGCCAACAGCCACCGCCACGCAGTAGGCATCGTTTTCATCGCTTAG
GAAATATTGACTCAATAGATATCGATAATGGGCCACGATATAAGAAAGAGCCTATACGAATGAAAGCGAATACAACGGAG
TTGTACGCCAAATATAAAGCTGAACAGAGCAACGTATCTGCTATTAGAACAGCTCAATGGGTTGCTGCGAGAAATAAAAA
AAATAGAGCTATAGAAGCCGCTAAACGGACTGGAAGATTAAAAAGGGCCGCAATAAAGCTATTAAATGGAAAGGGTGTAA
ATAAAAAAGCTCTGTATTCATTAACGAGCAGAACGGTAAAGATAGATGTAGAGAAAGCTAAAGCCGAATATCTAAAAGAA
CGCAAAGTTATATATGAAAAATGTAGACGACAAGCCTGGGCTGACTGGCTTAAGTCGAATGCAACCGAGGGTAACAAAGA
AGCATTGTCTGCGTTGAGATCTCGTGAATCTCGTCAAAAATTAAAGGGTAATACAGTTACTGGCAAACAAGCCGACAAAA
ATAATTCGACCCCCATTTCAGATATTACCCCAGATAACATTACTAAAACTGGAACCGTTATCTATCGTGTTGGTGACTCT
GCGATTAGAGATGATGGTGATTCTCTCAAAGTTTCCCGAGGGGCTTCTCAGGATGGTCTGGAAGCCGCTTTACATATGGC
CATAAAGCGCTACGGGGAAAATATTTCTGTAAATGGCAGTGATGAATTTAAAGAAAAAATAGTTCAAGCCGCCGTTAAAG
CAAAACTGAATATCAAATTTGACGACACAGATTTAGAGCTGCGTCGTCAATTTGTTATGTCCCAACAAGCCACTAAGGAG
CAAACACATGACAGTAGAACTGACAGCAGAACAACAAATAGAAGCAGCATTAGAACAATTGCAACAAGGGGAACAAGAGG
AGCCTCAATTCGAAAAAGAGAATCAGGAGGAAGAAACGCCAGAGATATCAAGCCCTACACTAGAAGCGTTGGAAGAACAC
CGCCGCCCGAAAAAACCCACAACCTGCGAAACCTGTCTGAACTCGATATGGTTCAGCACACCAACAGAAGTGAAGTGCTA
TTGCCGAGTTATGTTTCTAGTAACGTGGAGCAACAAGGAACCAAATCAAATGACGGGATGCGATGGGGTGTACGTAGGGC
AAGAGGAGTAATACATAAAAGACGTTCTATCGATGATAAAAGTCGAGATATACGGCCACAGGTGGCGCGTGTTGGAAAAG
CACCGCCCCCTAACAGCCAAAACAAATGGAGACACTTATCTCAGTTAAATAATTTAGAACTTGATCTAAAAGCAATACGC
CCACTGGTTGCCCGAGTAGGTACTACCCCACCGCCTCTAAGCCAAAACCGTTTACGCAGTTTGTCTGAATTGCGAAAAGT
GGAGTTGGCCCAAGGGGTTAAAAAGATTCAGCCTCCAGTAAATAAATCACCACTTGCTGATTTTATTCCCCAAAAGGTTA
TATCAACTCTTAGTACTGGTCAGGTTGCCGCTGATAAATATGTCAATGAGCGAGAGGCAAAACGTGGTAAAGGATTCGAT
ATAGTGAAACATTATCGATATAATGATTATAAAGGGGGCGCGAGTTTCGCTGGGATTCGTCAAATTGATAGCGAAAGCTT
AGCTCTTTTGAAATGCGACGATCACGTAATAGTTATGCCGGTTGAGGCTGCAACTGTTCGTCGCTTAAAGCGCCTGTCTA
TTGGTGATGAAGTGATTGTTACTGAAAAGGGTGTGATCAAAACGAAAGGACGTAGCAGATGA

Upstream 100 bases:

>100_bases
GTTCTTTTATGCCGTATTAGTGACACACAATCTGCCATGTTTGAAGTAGTGAAAAAGCTATGACCTTTTTTTTAGCGGCT
AAAATTTTAGGGGGTGTAGC

Downstream 100 bases:

>100_bases
CAACAAAATCTAATAGTGCTGTTGGCCCTCAGACTAAAGCCAGTCGAACCAAAAAAAGTAAGTTGGTTCCTATGCTGGCT
ATAACTTCATTGGCCGCAGG

Product: conjugal transfer relaxase TraI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 873; Mature: 873

Protein sequence:

>873_residues
MIIRHIPMKSVKRSSYSGLTKYITNEQGKQERVGDINITNCNSEDVDWAINEIQATQKLNTRATGDKTYHLFISFPAGES
PSADILKDIEARVCSSIGYGEHQRVSAVHHDTDNLHIHISINKIHPSKHTLHEPYRAYSTFGDIAGKLEIEHGLQQTNHT
AKKVGAENRAHDMEHHAGVESLLSWVKRECLESIRNSKSWGELHQVIQNNGLELRESGNGLIITDQQGIAVKASSVSRDI
SKGKLEVKLGKFEKPQPQNKRSPKNNIGHSKRPRVGKVGQQPPPRSRHRFHRLGNIDSIDIDNGPRYKKEPIRMKANTTE
LYAKYKAEQSNVSAIRTAQWVAARNKKNRAIEAAKRTGRLKRAAIKLLNGKGVNKKALYSLTSRTVKIDVEKAKAEYLKE
RKVIYEKCRRQAWADWLKSNATEGNKEALSALRSRESRQKLKGNTVTGKQADKNNSTPISDITPDNITKTGTVIYRVGDS
AIRDDGDSLKVSRGASQDGLEAALHMAIKRYGENISVNGSDEFKEKIVQAAVKAKLNIKFDDTDLELRRQFVMSQQATKE
QTHDSRTDSRTTNRSSIRTIATRGTRGASIRKRESGGRNARDIKPYTRSVGRTPPPEKTHNLRNLSELDMVQHTNRSEVL
LPSYVSSNVEQQGTKSNDGMRWGVRRARGVIHKRRSIDDKSRDIRPQVARVGKAPPPNSQNKWRHLSQLNNLELDLKAIR
PLVARVGTTPPPLSQNRLRSLSELRKVELAQGVKKIQPPVNKSPLADFIPQKVISTLSTGQVAADKYVNEREAKRGKGFD
IVKHYRYNDYKGGASFAGIRQIDSESLALLKCDDHVIVMPVEAATVRRLKRLSIGDEVIVTEKGVIKTKGRSR

Sequences:

>Translated_873_residues
MIIRHIPMKSVKRSSYSGLTKYITNEQGKQERVGDINITNCNSEDVDWAINEIQATQKLNTRATGDKTYHLFISFPAGES
PSADILKDIEARVCSSIGYGEHQRVSAVHHDTDNLHIHISINKIHPSKHTLHEPYRAYSTFGDIAGKLEIEHGLQQTNHT
AKKVGAENRAHDMEHHAGVESLLSWVKRECLESIRNSKSWGELHQVIQNNGLELRESGNGLIITDQQGIAVKASSVSRDI
SKGKLEVKLGKFEKPQPQNKRSPKNNIGHSKRPRVGKVGQQPPPRSRHRFHRLGNIDSIDIDNGPRYKKEPIRMKANTTE
LYAKYKAEQSNVSAIRTAQWVAARNKKNRAIEAAKRTGRLKRAAIKLLNGKGVNKKALYSLTSRTVKIDVEKAKAEYLKE
RKVIYEKCRRQAWADWLKSNATEGNKEALSALRSRESRQKLKGNTVTGKQADKNNSTPISDITPDNITKTGTVIYRVGDS
AIRDDGDSLKVSRGASQDGLEAALHMAIKRYGENISVNGSDEFKEKIVQAAVKAKLNIKFDDTDLELRRQFVMSQQATKE
QTHDSRTDSRTTNRSSIRTIATRGTRGASIRKRESGGRNARDIKPYTRSVGRTPPPEKTHNLRNLSELDMVQHTNRSEVL
LPSYVSSNVEQQGTKSNDGMRWGVRRARGVIHKRRSIDDKSRDIRPQVARVGKAPPPNSQNKWRHLSQLNNLELDLKAIR
PLVARVGTTPPPLSQNRLRSLSELRKVELAQGVKKIQPPVNKSPLADFIPQKVISTLSTGQVAADKYVNEREAKRGKGFD
IVKHYRYNDYKGGASFAGIRQIDSESLALLKCDDHVIVMPVEAATVRRLKRLSIGDEVIVTEKGVIKTKGRSR
>Mature_873_residues
MIIRHIPMKSVKRSSYSGLTKYITNEQGKQERVGDINITNCNSEDVDWAINEIQATQKLNTRATGDKTYHLFISFPAGES
PSADILKDIEARVCSSIGYGEHQRVSAVHHDTDNLHIHISINKIHPSKHTLHEPYRAYSTFGDIAGKLEIEHGLQQTNHT
AKKVGAENRAHDMEHHAGVESLLSWVKRECLESIRNSKSWGELHQVIQNNGLELRESGNGLIITDQQGIAVKASSVSRDI
SKGKLEVKLGKFEKPQPQNKRSPKNNIGHSKRPRVGKVGQQPPPRSRHRFHRLGNIDSIDIDNGPRYKKEPIRMKANTTE
LYAKYKAEQSNVSAIRTAQWVAARNKKNRAIEAAKRTGRLKRAAIKLLNGKGVNKKALYSLTSRTVKIDVEKAKAEYLKE
RKVIYEKCRRQAWADWLKSNATEGNKEALSALRSRESRQKLKGNTVTGKQADKNNSTPISDITPDNITKTGTVIYRVGDS
AIRDDGDSLKVSRGASQDGLEAALHMAIKRYGENISVNGSDEFKEKIVQAAVKAKLNIKFDDTDLELRRQFVMSQQATKE
QTHDSRTDSRTTNRSSIRTIATRGTRGASIRKRESGGRNARDIKPYTRSVGRTPPPEKTHNLRNLSELDMVQHTNRSEVL
LPSYVSSNVEQQGTKSNDGMRWGVRRARGVIHKRRSIDDKSRDIRPQVARVGKAPPPNSQNKWRHLSQLNNLELDLKAIR
PLVARVGTTPPPLSQNRLRSLSELRKVELAQGVKKIQPPVNKSPLADFIPQKVISTLSTGQVAADKYVNEREAKRGKGFD
IVKHYRYNDYKGGASFAGIRQIDSESLALLKCDDHVIVMPVEAATVRRLKRLSIGDEVIVTEKGVIKTKGRSR

Specific function: The initiation process of transfer DNA synthesis requires the interaction of at least three plasmid-specific components (traH, I, and J) at the transfer origin resulting in the assembly of a specialised nucleoprotein complex - the relaxosome. Site- and st

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005094 [H]

Pfam domain/function: PF03432 Relaxase [H]

EC number: NA

Molecular weight: Translated: 97940; Mature: 97940

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRHIPMKSVKRSSYSGLTKYITNEQGKQERVGDINITNCNSEDVDWAINEIQATQKLN
CEEECCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEECCCCCCHHHHHHHHHHHHHHC
TRATGDKTYHLFISFPAGESPSADILKDIEARVCSSIGYGEHQRVSAVHHDTDNLHIHIS
CCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEE
INKIHPSKHTLHEPYRAYSTFGDIAGKLEIEHGLQQTNHTAKKVGAENRAHDMEHHAGVE
EEEECCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHH
SLLSWVKRECLESIRNSKSWGELHQVIQNNGLELRESGNGLIITDQQGIAVKASSVSRDI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCEEEEECCCCCEEEHHHHHHHH
SKGKLEVKLGKFEKPQPQNKRSPKNNIGHSKRPRVGKVGQQPPPRSRHRFHRLGNIDSID
HCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEE
IDNGPRYKKEPIRMKANTTELYAKYKAEQSNVSAIRTAQWVAARNKKNRAIEAAKRTGRL
CCCCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KRAAIKLLNGKGVNKKALYSLTSRTVKIDVEKAKAEYLKERKVIYEKCRRQAWADWLKSN
HHHHHHHHCCCCCCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ATEGNKEALSALRSRESRQKLKGNTVTGKQADKNNSTPISDITPDNITKTGTVIYRVGDS
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCH
AIRDDGDSLKVSRGASQDGLEAALHMAIKRYGENISVNGSDEFKEKIVQAAVKAKLNIKF
HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHEEEEE
DDTDLELRRQFVMSQQATKEQTHDSRTDSRTTNRSSIRTIATRGTRGASIRKRESGGRNA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCCC
RDIKPYTRSVGRTPPPEKTHNLRNLSELDMVQHTNRSEVLLPSYVSSNVEQQGTKSNDGM
CCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHCCCCCCEEECHHHHCCHHHCCCCCCCCH
RWGVRRARGVIHKRRSIDDKSRDIRPQVARVGKAPPPNSQNKWRHLSQLNNLELDLKAIR
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
PLVARVGTTPPPLSQNRLRSLSELRKVELAQGVKKIQPPVNKSPLADFIPQKVISTLSTG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
QVAADKYVNEREAKRGKGFDIVKHYRYNDYKGGASFAGIRQIDSESLALLKCDDHVIVMP
CHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCEEEEE
VEAATVRRLKRLSIGDEVIVTEKGVIKTKGRSR
CCHHHHHHHHHHCCCCEEEEECCCEECCCCCCC
>Mature Secondary Structure
MIIRHIPMKSVKRSSYSGLTKYITNEQGKQERVGDINITNCNSEDVDWAINEIQATQKLN
CEEECCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEECCCCCCHHHHHHHHHHHHHHC
TRATGDKTYHLFISFPAGESPSADILKDIEARVCSSIGYGEHQRVSAVHHDTDNLHIHIS
CCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEE
INKIHPSKHTLHEPYRAYSTFGDIAGKLEIEHGLQQTNHTAKKVGAENRAHDMEHHAGVE
EEEECCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHH
SLLSWVKRECLESIRNSKSWGELHQVIQNNGLELRESGNGLIITDQQGIAVKASSVSRDI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCEEEEECCCCCEEEHHHHHHHH
SKGKLEVKLGKFEKPQPQNKRSPKNNIGHSKRPRVGKVGQQPPPRSRHRFHRLGNIDSID
HCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEE
IDNGPRYKKEPIRMKANTTELYAKYKAEQSNVSAIRTAQWVAARNKKNRAIEAAKRTGRL
CCCCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KRAAIKLLNGKGVNKKALYSLTSRTVKIDVEKAKAEYLKERKVIYEKCRRQAWADWLKSN
HHHHHHHHCCCCCCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ATEGNKEALSALRSRESRQKLKGNTVTGKQADKNNSTPISDITPDNITKTGTVIYRVGDS
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCH
AIRDDGDSLKVSRGASQDGLEAALHMAIKRYGENISVNGSDEFKEKIVQAAVKAKLNIKF
HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHEEEEE
DDTDLELRRQFVMSQQATKEQTHDSRTDSRTTNRSSIRTIATRGTRGASIRKRESGGRNA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCCC
RDIKPYTRSVGRTPPPEKTHNLRNLSELDMVQHTNRSEVLLPSYVSSNVEQQGTKSNDGM
CCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHCCCCCCEEECHHHHCCHHHCCCCCCCCH
RWGVRRARGVIHKRRSIDDKSRDIRPQVARVGKAPPPNSQNKWRHLSQLNNLELDLKAIR
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
PLVARVGTTPPPLSQNRLRSLSELRKVELAQGVKKIQPPVNKSPLADFIPQKVISTLSTG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
QVAADKYVNEREAKRGKGFDIVKHYRYNDYKGGASFAGIRQIDSESLALLKCDDHVIVMP
CHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCEEEEE
VEAATVRRLKRLSIGDEVIVTEKGVIKTKGRSR
CCHHHHHHHHHHCCCCEEEEECCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1665997; 2168553 [H]