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The map label for this gene is traJ [H]

Identifier: 153930576

GI number: 153930576

Start: 50056

End: 50412

Strand: Reverse

Name: traJ [H]

Synonym: YpsIP31758_A0027

Alternate gene names: 153930576

Gene position: 50412-50056 (Counterclockwise)

Preceding gene: 153930588

Following gene: 153930611

Centisome position: 85.91

GC content: 40.9

Gene sequence:

>357_bases
ATGATCGACACCGTAGGAAAAAAAATAACAAGAAAACACGGGCGACACTTGAGAGTGCCGGTGTTACCTGATGAGGAAAT
TTTAATCAAAGCGAATGCTGCTGCTGCCGGTTTAAGCATTGCTGAATATTTAAGGCGACTTGCTTTAGGTCACACCATTT
ATGGTGTTATTGACCAGCATCAAGTGATCGAGCTTTCAAAGATTAATGCCGATTTAGGTAGGCTTGGGGGGTTATTAAAG
CTCTGGCTAACAAATGATGAGCGCTTAGTTCGCTTGGATTCAAAAGCTATAGAAGTTCTTTTATGCCGTATTAGTGACAC
ACAATCTGCCATGTTTGAAGTAGTGAAAAAGCTATGA

Upstream 100 bases:

>100_bases
TCCCTTATTCGCGCCTCCGGCACTCAATGGGAATCTTGCTCTGCGAGGCTGGCTGGCTACCGCCGCCTTAGTGCTTAATT
CAATGGGAGTTAGGGGGTAA

Downstream 100 bases:

>100_bases
CCTTTTTTTTAGCGGCTAAAATTTTAGGGGGTGTAGCGTGATCATTCGCCATATTCCGATGAAATCTGTCAAGCGAAGCA
GCTATTCAGGTCTAACAAAA

Product: conjugal transfer relaxosome component TraJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MIDTVGKKITRKHGRHLRVPVLPDEEILIKANAAAAGLSIAEYLRRLALGHTIYGVIDQHQVIELSKINADLGRLGGLLK
LWLTNDERLVRLDSKAIEVLLCRISDTQSAMFEVVKKL

Sequences:

>Translated_118_residues
MIDTVGKKITRKHGRHLRVPVLPDEEILIKANAAAAGLSIAEYLRRLALGHTIYGVIDQHQVIELSKINADLGRLGGLLK
LWLTNDERLVRLDSKAIEVLLCRISDTQSAMFEVVKKL
>Mature_118_residues
MIDTVGKKITRKHGRHLRVPVLPDEEILIKANAAAAGLSIAEYLRRLALGHTIYGVIDQHQVIELSKINADLGRLGGLLK
LWLTNDERLVRLDSKAIEVLLCRISDTQSAMFEVVKKL

Specific function: This protein is essential for positively regulating the expression of transfer genes that are involved in the conjugal transfer of DNA between bacterial cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13177; Mature: 13177

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTVGKKITRKHGRHLRVPVLPDEEILIKANAAAAGLSIAEYLRRLALGHTIYGVIDQH
CCCCHHHHHHHHCCCEEECCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCC
QVIELSKINADLGRLGGLLKLWLTNDERLVRLDSKAIEVLLCRISDTQSAMFEVVKKL
CEEHHHHCCCCHHHHCCEEEEEECCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIDTVGKKITRKHGRHLRVPVLPDEEILIKANAAAAGLSIAEYLRRLALGHTIYGVIDQH
CCCCHHHHHHHHCCCEEECCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCC
QVIELSKINADLGRLGGLLKLWLTNDERLVRLDSKAIEVLLCRISDTQSAMFEVVKKL
CEEHHHHCCCCHHHHCCEEEEEECCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665997; 9753548; 2538813 [H]