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The map label for this gene is yutK [H]

Identifier: 152977228

GI number: 152977228

Start: 3612180

End: 3613406

Strand: Reverse

Name: yutK [H]

Synonym: Bcer98_3546

Alternate gene names: 152977228

Gene position: 3613406-3612180 (Counterclockwise)

Preceding gene: 152977229

Following gene: 152977227

Centisome position: 88.41

GC content: 40.26

Gene sequence:

>1227_bases
ATGAATATTATTTGGGGAGTAATTGGCATTATCGTTATTCTTTTTATTGGATATTTGCTTTCAAATAACAAACGTGCAAT
CTCATTGCGTACTGTATTTGGTGGACTTGCGATTCAAGTATTGTTTGGTTTTATCGTGCTAGAGTGGGACTTTGGTCGAA
GTGTATTAGAGAAAGTAACACAGTTTGTTCAAAGAATCATGGATTTTGCGAATGCTGGAATATTATTTTTATTTGGTAAT
TTAGGAGATCCAACGAAAATGGCGGGATTTGTTTTTGCGTTTCGTGTACTCCCAATTTTAATTTTTCTATCTTCAGTTAT
TGCGATTTTATATCACTTGGGAATTATGCAATGGATGGTTCGGAGTATTGGAGGAGCTTTAGCAAAGCTATTAGGAACAA
GTCAATCAGAATCATTATCTGCAGCGGCAAATATTTTTTTAGGACAGACGGAAGCGCCGCTTGTCATTCGTCCGTATATG
CCGCATTTAACGAAGTCCGAACTATTTGCTGTAATGGTTGGGGGATTAGCGTCAGTATCAGGCTCAACTCTATTTGGATA
TGCTGCACTAGGTGTGCCGCTTAAATTTTTATTAGCAGCAAGCGTAATGGCAGCGCCAGCTGGGCTTATTATGGCAAAAT
TATTGTTCCCCGAAACAGAAAAGAAAGAAGTGTGCACGATTTCGAAAGAGGATGAAAAAGATGAGCGTAAAAAGCCAACT
AACGTAATTGATGCAGCAGCACGCGGGGCAGCTGATGGATTATCACTCGCTTTAAATGTAGGCGCAATGCTGATTGCTTT
TATTGCTGTCATTGCTCTTTTAAATGGAATTGTAGGTGGAATCGGCGGTCTGTTCGGTTATTCTAATTTATCATTACAAC
TTATATTGGGATATATTTTTTCGCCACTTGCGTTTGCTATTGGGGTACCGTGGACAGAAGCAATTACCGCAGGAGGGTTT
ATTGGGGAAAAATTAATTTTAAATGAGTTTGTGGCGTTTACGGACTTTGCTCCGCAAATGGGAAAGCTTTCAGAGAAAAC
AACAGCGATGATTACATTCGCATTGTGCGGATTTGCCAACCTTTCTTCCGTAGCCATTTTACTTGGTGGTCTTGGCGGGA
TGGCACCGAATCGGCGAGGCGACATTGCTAAATTTGGTGTGAAGTCTATCATAGCTGGTACATTAGCAAATTTATTGAGC
GCTGCAATTGCAGGGATGTTTGCATGA

Upstream 100 bases:

>100_bases
CAGCGATGTAACACCTTTTGTTTTGTCACTTATTTCATGAGGAGTAAAAATTTATTTGGAGGAAATGCTAACAAAGAATT
TGAAGCTGTGAGGTGACAAA

Downstream 100 bases:

>100_bases
AATAAAAAAGGCCCTTTTAAGAAGGGCTTTTTCTTACACAATTCGTGTAAGAACGACTTCGATAAGGAAGTCGCCAAAAC
GTTGTCAAATATGAGAAACG

Product: nucleoside transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MNIIWGVIGIIVILFIGYLLSNNKRAISLRTVFGGLAIQVLFGFIVLEWDFGRSVLEKVTQFVQRIMDFANAGILFLFGN
LGDPTKMAGFVFAFRVLPILIFLSSVIAILYHLGIMQWMVRSIGGALAKLLGTSQSESLSAAANIFLGQTEAPLVIRPYM
PHLTKSELFAVMVGGLASVSGSTLFGYAALGVPLKFLLAASVMAAPAGLIMAKLLFPETEKKEVCTISKEDEKDERKKPT
NVIDAAARGAADGLSLALNVGAMLIAFIAVIALLNGIVGGIGGLFGYSNLSLQLILGYIFSPLAFAIGVPWTEAITAGGF
IGEKLILNEFVAFTDFAPQMGKLSEKTTAMITFALCGFANLSSVAILLGGLGGMAPNRRGDIAKFGVKSIIAGTLANLLS
AAIAGMFA

Sequences:

>Translated_408_residues
MNIIWGVIGIIVILFIGYLLSNNKRAISLRTVFGGLAIQVLFGFIVLEWDFGRSVLEKVTQFVQRIMDFANAGILFLFGN
LGDPTKMAGFVFAFRVLPILIFLSSVIAILYHLGIMQWMVRSIGGALAKLLGTSQSESLSAAANIFLGQTEAPLVIRPYM
PHLTKSELFAVMVGGLASVSGSTLFGYAALGVPLKFLLAASVMAAPAGLIMAKLLFPETEKKEVCTISKEDEKDERKKPT
NVIDAAARGAADGLSLALNVGAMLIAFIAVIALLNGIVGGIGGLFGYSNLSLQLILGYIFSPLAFAIGVPWTEAITAGGF
IGEKLILNEFVAFTDFAPQMGKLSEKTTAMITFALCGFANLSSVAILLGGLGGMAPNRRGDIAKFGVKSIIAGTLANLLS
AAIAGMFA
>Mature_408_residues
MNIIWGVIGIIVILFIGYLLSNNKRAISLRTVFGGLAIQVLFGFIVLEWDFGRSVLEKVTQFVQRIMDFANAGILFLFGN
LGDPTKMAGFVFAFRVLPILIFLSSVIAILYHLGIMQWMVRSIGGALAKLLGTSQSESLSAAANIFLGQTEAPLVIRPYM
PHLTKSELFAVMVGGLASVSGSTLFGYAALGVPLKFLLAASVMAAPAGLIMAKLLFPETEKKEVCTISKEDEKDERKKPT
NVIDAAARGAADGLSLALNVGAMLIAFIAVIALLNGIVGGIGGLFGYSNLSLQLILGYIFSPLAFAIGVPWTEAITAGGF
IGEKLILNEFVAFTDFAPQMGKLSEKTTAMITFALCGFANLSSVAILLGGLGGMAPNRRGDIAKFGVKSIIAGTLANLLS
AAIAGMFA

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI227116277, Length=413, Percent_Identity=39.9515738498789, Blast_Score=303, Evalue=2e-82,
Organism=Homo sapiens, GI11545853, Length=381, Percent_Identity=40.6824146981627, Blast_Score=296, Evalue=3e-80,
Organism=Homo sapiens, GI42542381, Length=413, Percent_Identity=37.5302663438257, Blast_Score=280, Evalue=2e-75,
Organism=Escherichia coli, GI1788485, Length=416, Percent_Identity=46.3942307692308, Blast_Score=343, Evalue=9e-96,
Organism=Escherichia coli, GI1788488, Length=416, Percent_Identity=44.2307692307692, Blast_Score=321, Evalue=6e-89,
Organism=Escherichia coli, GI1788737, Length=407, Percent_Identity=30.958230958231, Blast_Score=192, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17560276, Length=392, Percent_Identity=33.6734693877551, Blast_Score=232, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI71991794, Length=403, Percent_Identity=32.0099255583127, Blast_Score=222, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI25146537, Length=202, Percent_Identity=35.1485148514851, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI45552519, Length=395, Percent_Identity=39.2405063291139, Blast_Score=285, Evalue=4e-77,
Organism=Drosophila melanogaster, GI45552517, Length=395, Percent_Identity=39.2405063291139, Blast_Score=285, Evalue=4e-77,
Organism=Drosophila melanogaster, GI19921868, Length=395, Percent_Identity=39.2405063291139, Blast_Score=285, Evalue=4e-77,
Organism=Drosophila melanogaster, GI281360430, Length=405, Percent_Identity=38.2716049382716, Blast_Score=249, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 43043; Mature: 43043

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIWGVIGIIVILFIGYLLSNNKRAISLRTVFGGLAIQVLFGFIVLEWDFGRSVLEKVT
CCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
QFVQRIMDFANAGILFLFGNLGDPTKMAGFVFAFRVLPILIFLSSVIAILYHLGIMQWMV
HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSIGGALAKLLGTSQSESLSAAANIFLGQTEAPLVIRPYMPHLTKSELFAVMVGGLASVS
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC
GSTLFGYAALGVPLKFLLAASVMAAPAGLIMAKLLFPETEKKEVCTISKEDEKDERKKPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHCCCH
NVIDAAARGAADGLSLALNVGAMLIAFIAVIALLNGIVGGIGGLFGYSNLSLQLILGYIF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SPLAFAIGVPWTEAITAGGFIGEKLILNEFVAFTDFAPQMGKLSEKTTAMITFALCGFAN
HHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCH
LSSVAILLGGLGGMAPNRRGDIAKFGVKSIIAGTLANLLSAAIAGMFA
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIIWGVIGIIVILFIGYLLSNNKRAISLRTVFGGLAIQVLFGFIVLEWDFGRSVLEKVT
CCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
QFVQRIMDFANAGILFLFGNLGDPTKMAGFVFAFRVLPILIFLSSVIAILYHLGIMQWMV
HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSIGGALAKLLGTSQSESLSAAANIFLGQTEAPLVIRPYMPHLTKSELFAVMVGGLASVS
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC
GSTLFGYAALGVPLKFLLAASVMAAPAGLIMAKLLFPETEKKEVCTISKEDEKDERKKPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHCCCH
NVIDAAARGAADGLSLALNVGAMLIAFIAVIALLNGIVGGIGGLFGYSNLSLQLILGYIF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SPLAFAIGVPWTEAITAGGFIGEKLILNEFVAFTDFAPQMGKLSEKTTAMITFALCGFAN
HHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCH
LSSVAILLGGLGGMAPNRRGDIAKFGVKSIIAGTLANLLSAAIAGMFA
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]