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The map label for this gene is ybeY [C]

Identifier: 152976733

GI number: 152976733

Start: 3075226

End: 3075696

Strand: Reverse

Name: ybeY [C]

Synonym: Bcer98_3029

Alternate gene names: 152976733

Gene position: 3075696-3075226 (Counterclockwise)

Preceding gene: 152976734

Following gene: 152976732

Centisome position: 75.26

GC content: 37.15

Gene sequence:

>471_bases
ATGAGTTTAGTAATTGATTTTTTTGATGAAACAGAAGAAGTGAAAGAAGAATATGTGAATATGATTCGTGAGCTGTTAGA
AAAGGCTGCACAAATGGAAGGAGTGGAAGATGGGACGGAACTGTCTGTTACTTTCGTTGATAATGAACGGATTCGAGAAA
TAAATCGTGATTATCGCGGAAAAGATCAGCCTACGGACGTGATTTCTTTTGCTCTTGAAGATATGGGAGAGGGTGAGGTC
GAAATCATAGGTGCTGATATGCCTCGTATGCTAGGAGATCTTATTATTTCTATTCCGAGAACAAAAGAACAGGCTGAAGA
ATATGGCCATTCTTTTGACCGTGAATTAGGATTTTTAGCGTTACATGGATTTTTACACTTGCTTGGTTATGATCATATGA
CTGAAGAAGATGAAAAAGAGATGTTTGGAAAGCAAAAAGAAATTTTAGGGGCATTTGGATTAAGAAGATGA

Upstream 100 bases:

>100_bases
AAGAACTACAGATAGTAGGAAAAACTTTATGTGAAACATTGAATGGGATTTTCCATTCTCGTATTAAATATCCGGAACCA
CTGGAAGAAAAGGTGAAAGA

Downstream 100 bases:

>100_bases
AAAAAGGAAAACTTATAAAGAGTTTTACGTATGCTATAGCTGGTATATGTTTTTGTCTTCGTCATGAACGAAATATGAAA
ATTCATTGTTTGGCCGCAGT

Product: putative metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSLVIDFFDETEEVKEEYVNMIRELLEKAAQMEGVEDGTELSVTFVDNERIREINRDYRGKDQPTDVISFALEDMGEGEV
EIIGADMPRMLGDLIISIPRTKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGKQKEILGAFGLRR

Sequences:

>Translated_156_residues
MSLVIDFFDETEEVKEEYVNMIRELLEKAAQMEGVEDGTELSVTFVDNERIREINRDYRGKDQPTDVISFALEDMGEGEV
EIIGADMPRMLGDLIISIPRTKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGKQKEILGAFGLRR
>Mature_155_residues
SLVIDFFDETEEVKEEYVNMIRELLEKAAQMEGVEDGTELSVTFVDNERIREINRDYRGKDQPTDVISFALEDMGEGEVE
IIGADMPRMLGDLIISIPRTKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGKQKEILGAFGLRR

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family

Homologues:

Organism=Homo sapiens, GI54607072, Length=158, Percent_Identity=33.5443037974684, Blast_Score=75, Evalue=3e-14,
Organism=Escherichia coli, GI1786880, Length=115, Percent_Identity=35.6521739130435, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RRMF_BACCN (A7GSZ7)

Other databases:

- EMBL:   CP000764
- RefSeq:   YP_001376250.1
- ProteinModelPortal:   A7GSZ7
- SMR:   A7GSZ7
- STRING:   A7GSZ7
- EnsemblBacteria:   EBBACT00000039841
- GeneID:   5347505
- GenomeReviews:   CP000764_GR
- KEGG:   bcy:Bcer98_3029
- eggNOG:   COG0319
- GeneTree:   EBGT00050000002084
- HOGENOM:   HBG734136
- OMA:   LNGYDHM
- ProtClustDB:   PRK00016
- BioCyc:   BCER315749:BCER98_3029-MONOMER
- HAMAP:   MF_00009
- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036
- Gene3D:   G3DSA:3.40.390.30
- TIGRFAMs:   TIGR00043

Pfam domain/function: PF02130 UPF0054

EC number: NA

Molecular weight: Translated: 17997; Mature: 17865

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVIDFFDETEEVKEEYVNMIRELLEKAAQMEGVEDGTELSVTFVDNERIREINRDYRG
CCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCC
KDQPTDVISFALEDMGEGEVEIIGADMPRMLGDLIISIPRTKEQAEEYGHSFDRELGFLA
CCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LHGFLHLLGYDHMTEEDEKEMFGKQKEILGAFGLRR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLVIDFFDETEEVKEEYVNMIRELLEKAAQMEGVEDGTELSVTFVDNERIREINRDYRG
CEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCC
KDQPTDVISFALEDMGEGEVEIIGADMPRMLGDLIISIPRTKEQAEEYGHSFDRELGFLA
CCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LHGFLHLLGYDHMTEEDEKEMFGKQKEILGAFGLRR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA