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The map label for this gene is ganQ [H]

Identifier: 152976424

GI number: 152976424

Start: 2796753

End: 2797595

Strand: Reverse

Name: ganQ [H]

Synonym: Bcer98_2712

Alternate gene names: 152976424

Gene position: 2797595-2796753 (Counterclockwise)

Preceding gene: 152976425

Following gene: 152976423

Centisome position: 68.45

GC content: 32.74

Gene sequence:

>843_bases
ATGAATATAAAACGACAAAAAATATTACGTCTTTCATTAAGTTATTTTGTAATTTTTATGATGTGTGTTATTATTTTTTA
CCCATTATTATGGATTATAGGTTCATCATTTAATCCAGGAGATAGTTTATCAGGATCCAGTATTATTCCAAAAAATGCGA
CACTGGATCACTATCGTGAATTGTTGAATCTTGATGCGAGTAATTATTTACTATGGTATAAAAATACATTGAAAGTTAGT
GTATTAACCATGATTTTCTCTGTTTTATCCATTAGTTTTACGGCATATGCTTTTTCACGGTATCGCTTTGTAGGAAGGAA
AAACGGTTTGTTAACGTTTTTGATTTTACAAATGATACCAAACTTTTCAGCGTTAATTGCATTATATATATTGGCGCAAT
TAACGGGATTAATTGATACACATTTCGCCCTAATTTTAATTTATGTTGGGGGCGCAATTCCGATGAATACGTGGCTCATG
AAAGGGTATTTTGATACGATTCCAAAAGAGCTAGATGAATCAGCTCGTATGGATGGAGCAGGCCATTTCCGAATTTTTTG
GCAAATTATTATGCCGCTTGCGAAACCGATTATAGCAGTGGTCGCATTATTTACCTTCATTGGACCATTTACAGATTTTA
TTTTAGCCAGTATCATTTTACGTACGCCAGAAAATTATACATTAGCTGTTGGCCTATATGAAATGGTGGCAAAAAAGTTT
GGAAATGAATTTACAACTTTTGCAGCTGGTTCTGTATTGATTGCGATACCAATTTCTATCTTATTTTTATCACTACAAAA
ATACTTTATTTCTGGTTTAACAGCTGGAGGAACGAAAGGATGA

Upstream 100 bases:

>100_bases
AGCAGCGGCATTAACAATGATTCTGTCATTCATTGTTATTTCAGTAGCGTTATGGCAATTTAAAAGAACAAAATCATTCC
AAGAAGAGGATATGATGTAA

Downstream 100 bases:

>100_bases
AAATGGGACATATTGTTCCATTTCTTTTTTTAGAGAGATTCATATTCCGTTGAAAAAGAGAAATGATGTGAAAAATAGTA
TAGGAAAATAAGCCTATATC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNIKRQKILRLSLSYFVIFMMCVIIFYPLLWIIGSSFNPGDSLSGSSIIPKNATLDHYRELLNLDASNYLLWYKNTLKVS
VLTMIFSVLSISFTAYAFSRYRFVGRKNGLLTFLILQMIPNFSALIALYILAQLTGLIDTHFALILIYVGGAIPMNTWLM
KGYFDTIPKELDESARMDGAGHFRIFWQIIMPLAKPIIAVVALFTFIGPFTDFILASIILRTPENYTLAVGLYEMVAKKF
GNEFTTFAAGSVLIAIPISILFLSLQKYFISGLTAGGTKG

Sequences:

>Translated_280_residues
MNIKRQKILRLSLSYFVIFMMCVIIFYPLLWIIGSSFNPGDSLSGSSIIPKNATLDHYRELLNLDASNYLLWYKNTLKVS
VLTMIFSVLSISFTAYAFSRYRFVGRKNGLLTFLILQMIPNFSALIALYILAQLTGLIDTHFALILIYVGGAIPMNTWLM
KGYFDTIPKELDESARMDGAGHFRIFWQIIMPLAKPIIAVVALFTFIGPFTDFILASIILRTPENYTLAVGLYEMVAKKF
GNEFTTFAAGSVLIAIPISILFLSLQKYFISGLTAGGTKG
>Mature_280_residues
MNIKRQKILRLSLSYFVIFMMCVIIFYPLLWIIGSSFNPGDSLSGSSIIPKNATLDHYRELLNLDASNYLLWYKNTLKVS
VLTMIFSVLSISFTAYAFSRYRFVGRKNGLLTFLILQMIPNFSALIALYILAQLTGLIDTHFALILIYVGGAIPMNTWLM
KGYFDTIPKELDESARMDGAGHFRIFWQIIMPLAKPIIAVVALFTFIGPFTDFILASIILRTPENYTLAVGLYEMVAKKF
GNEFTTFAAGSVLIAIPISILFLSLQKYFISGLTAGGTKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=294, Percent_Identity=36.0544217687075, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1787571, Length=260, Percent_Identity=31.5384615384615, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1789860, Length=182, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31402; Mature: 31402

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKRQKILRLSLSYFVIFMMCVIIFYPLLWIIGSSFNPGDSLSGSSIIPKNATLDHYRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
LLNLDASNYLLWYKNTLKVSVLTMIFSVLSISFTAYAFSRYRFVGRKNGLLTFLILQMIP
HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
NFSALIALYILAQLTGLIDTHFALILIYVGGAIPMNTWLMKGYFDTIPKELDESARMDGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
GHFRIFWQIIMPLAKPIIAVVALFTFIGPFTDFILASIILRTPENYTLAVGLYEMVAKKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
GNEFTTFAAGSVLIAIPISILFLSLQKYFISGLTAGGTKG
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNIKRQKILRLSLSYFVIFMMCVIIFYPLLWIIGSSFNPGDSLSGSSIIPKNATLDHYRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
LLNLDASNYLLWYKNTLKVSVLTMIFSVLSISFTAYAFSRYRFVGRKNGLLTFLILQMIP
HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
NFSALIALYILAQLTGLIDTHFALILIYVGGAIPMNTWLMKGYFDTIPKELDESARMDGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
GHFRIFWQIIMPLAKPIIAVVALFTFIGPFTDFILASIILRTPENYTLAVGLYEMVAKKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
GNEFTTFAAGSVLIAIPISILFLSLQKYFISGLTAGGTKG
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]