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The map label for this gene is ykrA [H]

Identifier: 152976389

GI number: 152976389

Start: 2761335

End: 2762108

Strand: Reverse

Name: ykrA [H]

Synonym: Bcer98_2677

Alternate gene names: 152976389

Gene position: 2762108-2761335 (Counterclockwise)

Preceding gene: 152976392

Following gene: 152976386

Centisome position: 67.58

GC content: 34.63

Gene sequence:

>774_bases
ATGAATGATAAAATTGTCTTTTTTGATATTGATGGAACATTGTTAGATCATGATAAAAAAATTCCGCAATCTACAAGAGA
AGCAGTGCGTACTTTACAAGAAAAGGGAGTCCATGTAGCAATTGCAACGGGACGTGCTCCGTTTATGTTTGAAGATATCC
GTCATGAGCTCAATATTCATAATTATGTTAGTTTTAATGGTCAATATGTTGTATTTGAGGATGAGGTCATCTTTAAAAAT
CCACTACGCTCAGAAACGCTTCGTAAATTTACAACATTTGCAAAACAAGAAGGGTATCCACTTGTTTATTTAGACGATCA
AGATATGAAAGCAACGGTAGAATATCATGATTATGTAAAAGAAGGTTTTGGGAGTTTGCAATTTGAACACCCAGTATATG
AGCCTAATTTTCATGAAAATCGTGATATTTATCAAACGCTTGTTTTCTGCCAAGCAGGTGAAGAAGAAAAGTTTATTCAT
GATTATCCAGATTTTCATTTTATTCGTTGGCACGCATATTCAATGGATATTATTCCTAATGGAGGTTCAAAAGCGAAAGG
AATCGAAAAGTTTATTGAGAAATTAGGATTTCAGAGAGAACAAGTGTATGCTTTTGGGGATGGACTGAATGATTTAGAAA
TGATTGAAGCAGTTGGAACAGGAATTGTAATGGGAAATGGTCATGAAGAGCTGAAGAAACTTGCAAATTATGTAACAAAA
GATGTGAGTGAAGGCGGGATTCATCATGGGTTACAGTGGGCTGGTTTAATTTAA

Upstream 100 bases:

>100_bases
TGCTTACTTTAAAGATGGTTAATATGTTATACTTTTTTTTAGTATTTTAAAAGTGATAGTAAAGTTAGAAGTATATAAGA
AGTGGAAAGGGTTTTGATAA

Downstream 100 bases:

>100_bases
AATAGAGATAAAAACTGTTTCATAGAGAACGATTGGATAAGAATGAAAAAGCAGAAGCGTAGCTTCTGCTTTTTAGCGTT
CAAGAGGTTTTGCGTTTTCA

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNDKIVFFDIDGTLLDHDKKIPQSTREAVRTLQEKGVHVAIATGRAPFMFEDIRHELNIHNYVSFNGQYVVFEDEVIFKN
PLRSETLRKFTTFAKQEGYPLVYLDDQDMKATVEYHDYVKEGFGSLQFEHPVYEPNFHENRDIYQTLVFCQAGEEEKFIH
DYPDFHFIRWHAYSMDIIPNGGSKAKGIEKFIEKLGFQREQVYAFGDGLNDLEMIEAVGTGIVMGNGHEELKKLANYVTK
DVSEGGIHHGLQWAGLI

Sequences:

>Translated_257_residues
MNDKIVFFDIDGTLLDHDKKIPQSTREAVRTLQEKGVHVAIATGRAPFMFEDIRHELNIHNYVSFNGQYVVFEDEVIFKN
PLRSETLRKFTTFAKQEGYPLVYLDDQDMKATVEYHDYVKEGFGSLQFEHPVYEPNFHENRDIYQTLVFCQAGEEEKFIH
DYPDFHFIRWHAYSMDIIPNGGSKAKGIEKFIEKLGFQREQVYAFGDGLNDLEMIEAVGTGIVMGNGHEELKKLANYVTK
DVSEGGIHHGLQWAGLI
>Mature_257_residues
MNDKIVFFDIDGTLLDHDKKIPQSTREAVRTLQEKGVHVAIATGRAPFMFEDIRHELNIHNYVSFNGQYVVFEDEVIFKN
PLRSETLRKFTTFAKQEGYPLVYLDDQDMKATVEYHDYVKEGFGSLQFEHPVYEPNFHENRDIYQTLVFCQAGEEEKFIH
DYPDFHFIRWHAYSMDIIPNGGSKAKGIEKFIEKLGFQREQVYAFGDGLNDLEMIEAVGTGIVMGNGHEELKKLANYVTK
DVSEGGIHHGLQWAGLI

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=268, Percent_Identity=28.7313432835821, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI48994981, Length=243, Percent_Identity=27.1604938271605, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29661; Mature: 29661

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKIVFFDIDGTLLDHDKKIPQSTREAVRTLQEKGVHVAIATGRAPFMFEDIRHELNIH
CCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCC
NYVSFNGQYVVFEDEVIFKNPLRSETLRKFTTFAKQEGYPLVYLDDQDMKATVEYHDYVK
EEEEECCEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHH
EGFGSLQFEHPVYEPNFHENRDIYQTLVFCQAGEEEKFIHDYPDFHFIRWHAYSMDIIPN
HCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEEC
GGSKAKGIEKFIEKLGFQREQVYAFGDGLNDLEMIEAVGTGIVMGNGHEELKKLANYVTK
CCCCHHHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHH
DVSEGGIHHGLQWAGLI
HHHCCCHHCCCEEECCC
>Mature Secondary Structure
MNDKIVFFDIDGTLLDHDKKIPQSTREAVRTLQEKGVHVAIATGRAPFMFEDIRHELNIH
CCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCC
NYVSFNGQYVVFEDEVIFKNPLRSETLRKFTTFAKQEGYPLVYLDDQDMKATVEYHDYVK
EEEEECCEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHH
EGFGSLQFEHPVYEPNFHENRDIYQTLVFCQAGEEEKFIHDYPDFHFIRWHAYSMDIIPN
HCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEEC
GGSKAKGIEKFIEKLGFQREQVYAFGDGLNDLEMIEAVGTGIVMGNGHEELKKLANYVTK
CCCCHHHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHH
DVSEGGIHHGLQWAGLI
HHHCCCHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]