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The map label for this gene is rbgA [H]

Identifier: 152976204

GI number: 152976204

Start: 2589493

End: 2590356

Strand: Reverse

Name: rbgA [H]

Synonym: Bcer98_2490

Alternate gene names: 152976204

Gene position: 2590356-2589493 (Counterclockwise)

Preceding gene: 152976205

Following gene: 152976203

Centisome position: 63.38

GC content: 37.15

Gene sequence:

>864_bases
ATGGCAATTCAATGGTTTCCAGGGCATATGGCAAAAGCTAGACGCCAAGTAACAGAAAAGTTAAAGTTAATCGATGTTGT
AATTGAATTAGTAGATGCACGTTTACCTTTATCTTCTCGAAACCCAATGATTGATGAAATCATTACACATAAACCAAGGT
TAGTTGTTTTAAATAAAGCAGATATGGCGGATGATCGTCTCACTAAACAATGGATTACATATTTTGAAGAAAAAGGTCAT
AAGGCAATTTCAATCAACGCTCAAGCTGGACAAGGTATGAAAGAGATTACAGCTGCATGTAAAGAACTTGTCAAGGAAAA
GTTTGATAAAATGATTGCGAAAGGAATTAAACCAAGAGCAATCCGTGCATTGATTGTTGGTATCCCGAATGTCGGTAAAT
CGACACTCATTAATAAATTAGCGAAGAAAAATATTGCAAAAACTGGCGACCGTCCAGGGGTAACAACAGCGCAGCAATGG
ATTAAAGTTGGTAAAGAAATGGAGTTGTTAGATACGCCAGGAATTTTATGGCCGAAATTTGAAGATGAATTAGTTGGCCT
TCGTCTTGCAACGACTGGTGCCATTAAAGATTCCATTTTAAACTTACAAGACGTCGCAGTCTATGCTCTTCGTTTTATGG
AGAAACATTATCCAGAACGTTTAAAAGAGCGTTATAAATTAGAAGATATTCCAGAAGACATTGTTGAACTATTTGATGCA
ATTGGAAAAAATAGAGGCTGTTTAATGGGTGGCGGACTTATTGATTATGATAAGACTTCAGAGCTTATTCTTCGTGAACT
GCGCGGTGGTAAACTGGGAAGAATGACATTTGAATCACCGGAGGAATTTGCAGAAGAAGCATAA

Upstream 100 bases:

>100_bases
GTACAATTAAAATGGATCAAGTAATTGGAAAAGCAAATGTATTATACTGGCCGTTAAAAGATGCACGTATTGTGAAATAA
ACAAAAAAGAAGGTGGCAAC

Downstream 100 bases:

>100_bases
GAAGACGTGCGGTTGTACGTCTTTTTTTTGAGTGTTTCAAAAAGGGGGACAGATCATGGGCAAATGGACAATTAAAGAAG
CAAGTGAATTATTGCAAGAA

Product: ribosomal biogenesis GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MAIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADMADDRLTKQWITYFEEKGH
KAISINAQAGQGMKEITAACKELVKEKFDKMIAKGIKPRAIRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQW
IKVGKEMELLDTPGILWPKFEDELVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYKLEDIPEDIVELFDA
IGKNRGCLMGGGLIDYDKTSELILRELRGGKLGRMTFESPEEFAEEA

Sequences:

>Translated_287_residues
MAIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADMADDRLTKQWITYFEEKGH
KAISINAQAGQGMKEITAACKELVKEKFDKMIAKGIKPRAIRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQW
IKVGKEMELLDTPGILWPKFEDELVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYKLEDIPEDIVELFDA
IGKNRGCLMGGGLIDYDKTSELILRELRGGKLGRMTFESPEEFAEEA
>Mature_286_residues
AIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADMADDRLTKQWITYFEEKGHK
AISINAQAGQGMKEITAACKELVKEKFDKMIAKGIKPRAIRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWI
KVGKEMELLDTPGILWPKFEDELVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYKLEDIPEDIVELFDAI
GKNRGCLMGGGLIDYDKTSELILRELRGGKLGRMTFESPEEFAEEA

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=303, Percent_Identity=32.3432343234323, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI45643129, Length=298, Percent_Identity=25.503355704698, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI45643127, Length=298, Percent_Identity=25.503355704698, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI45593130, Length=300, Percent_Identity=25.3333333333333, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7019419, Length=254, Percent_Identity=24.4094488188976, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI296317324, Length=279, Percent_Identity=25.8064516129032, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI9506611, Length=279, Percent_Identity=25.8064516129032, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193211047, Length=228, Percent_Identity=28.0701754385965, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI32563985, Length=249, Percent_Identity=28.5140562248996, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71990926, Length=249, Percent_Identity=27.3092369477912, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32563983, Length=249, Percent_Identity=27.3092369477912, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17534827, Length=282, Percent_Identity=25.886524822695, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI25143545, Length=277, Percent_Identity=26.3537906137184, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI115535155, Length=277, Percent_Identity=26.3537906137184, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71982363, Length=179, Percent_Identity=30.1675977653631, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323744, Length=242, Percent_Identity=32.6446280991736, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324381, Length=270, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6320842, Length=276, Percent_Identity=24.6376811594203, Blast_Score=79, Evalue=7e-16,
Organism=Drosophila melanogaster, GI85815858, Length=309, Percent_Identity=30.7443365695793, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI19922460, Length=267, Percent_Identity=26.9662921348315, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28572990, Length=174, Percent_Identity=33.9080459770115, Blast_Score=84, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 32364; Mature: 32233

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKA
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECC
DMADDRLTKQWITYFEEKGHKAISINAQAGQGMKEITAACKELVKEKFDKMIAKGIKPRA
CCCHHHHHHHHHHHHHHCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKF
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCC
EDELVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYKLEDIPEDIVELFDA
HHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IGKNRGCLMGGGLIDYDKTSELILRELRGGKLGRMTFESPEEFAEEA
HCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
AIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKA
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECC
DMADDRLTKQWITYFEEKGHKAISINAQAGQGMKEITAACKELVKEKFDKMIAKGIKPRA
CCCHHHHHHHHHHHHHHCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKF
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCC
EDELVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYKLEDIPEDIVELFDA
HHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IGKNRGCLMGGGLIDYDKTSELILRELRGGKLGRMTFESPEEFAEEA
HCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]