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The map label for this gene is ymfF [H]

Identifier: 152976153

GI number: 152976153

Start: 2530862

End: 2532136

Strand: Reverse

Name: ymfF [H]

Synonym: Bcer98_2439

Alternate gene names: 152976153

Gene position: 2532136-2530862 (Counterclockwise)

Preceding gene: 152976154

Following gene: 152976152

Centisome position: 61.96

GC content: 35.84

Gene sequence:

>1275_bases
ATGAAATTGATGGAACAGCAAATGCATGAGTTAGGTGGTTTACGAGTACATATCATTCCAACAGATAAGTATAAAACAAA
TACATTTGTATTTCGCTTTAAGGCACCTTTAAATGAAGAAACTGTGACAGAGCGTGCTATTTTGCCTTACGTTTTACAAA
GCGCTACCGAGAAATTGCCATCTGTCATTCGTCTTCGCCAATATTTAGAGGAATTATATGGGTCTTCTTTAGCGGTAGAT
GTAAGTAAAAAAGGTGAGGAGCATATCATATCTATTTACATGGATGTCGCCAATGAGAAATATTTACAAGATGCTCCGCC
TCTTTTTGAAAAAGCGCTTTCTATGTTATCTGATATTGTGTTACATCCAGCAACTGAAGGAAAGGGTTTTTTACAGTCTA
TTGTGGAGAGTGAGAAGCGAGCGCTTCTACAACGAATTGAAGCAACATATGATGATAAAATGCGTTATGCAAATGAACGT
CTCATTGAAGAAATGTGTAAAGTCGAACCATATCGATTAAGCTCCAACGGGAAAAAAGAAGATGTTCCGCTCATTACAAG
TGAAAAGTTATATCAATATTATCAAAAAGTGTTAGCGGAAGATGAAATGGATCTTTATATTATTGGAGATATTTCAGACA
ATGCAGCCGAACTCGTTCGTAAATATTTTTCCATTTCACCACGCGTACCGAAAGAAAAAAATGTAATACTTCATAAACGA
AATAACGAAGAAAAAGAGGTTGTTGAGAAACAAGAACTAAAACAAAGTAAATTAAATATCGGTTATCGCACATATGTGAC
CTATCGTGATGAAGATTACTTTGCACTACAATTATTTAACGGTTTATTTGGTGGGTTCTCGCATTCCAAATTGTTTGTGA
ATGTTCGGGAAAAAAATAGTTTAGCGTATTATGCCGCTTCACGCTTTGAAAGTCATAAAGGCTTGCTCTTTGTTATGTCT
GGAATTGAAGGAAAGAATTATGAAAAAGCGGTTGCTATTATTAAAGAGCAGATGAAGGCGATGAAGAATGGTGATTTCTC
AGAGGAAGAAATTCAGCAAACAAAAAGTGTAATTCGAAATCAAATTTTAGAAGCGATTGATACACCACGTGGTTTCGTTG
AACTATTATACCATGGTATTATTGCGGAACATACACGTCCAGTAGAAGAATGGGTCACGGGAATAGAATCGGTTACGAAA
GAAGAAATTGTGAAGGTCGCAAATCAAATTGAGTTAGATACGATTTACTTCTTACATGGAACGGAGGGAGAATAG

Upstream 100 bases:

>100_bases
ACAAGAACTTAAAAGTAAAAAGGAAGAAAAGTTGATTTTTGATTTCTAAAAACTGTATATTGAAGAGGAATATTCCTACA
TAGGTAAAGGAGGGCTATAA

Downstream 100 bases:

>100_bases
ATGGAGAAGATTGCTTATGATCAATTACAAGAAACGCTTTATTATGAAAAGCTTCCAAATGGATTAGATGTATATATCTT
ACCGAAGCACGGATTCAATA

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKLMEQQMHELGGLRVHIIPTDKYKTNTFVFRFKAPLNEETVTERAILPYVLQSATEKLPSVIRLRQYLEELYGSSLAVD
VSKKGEEHIISIYMDVANEKYLQDAPPLFEKALSMLSDIVLHPATEGKGFLQSIVESEKRALLQRIEATYDDKMRYANER
LIEEMCKVEPYRLSSNGKKEDVPLITSEKLYQYYQKVLAEDEMDLYIIGDISDNAAELVRKYFSISPRVPKEKNVILHKR
NNEEKEVVEKQELKQSKLNIGYRTYVTYRDEDYFALQLFNGLFGGFSHSKLFVNVREKNSLAYYAASRFESHKGLLFVMS
GIEGKNYEKAVAIIKEQMKAMKNGDFSEEEIQQTKSVIRNQILEAIDTPRGFVELLYHGIIAEHTRPVEEWVTGIESVTK
EEIVKVANQIELDTIYFLHGTEGE

Sequences:

>Translated_424_residues
MKLMEQQMHELGGLRVHIIPTDKYKTNTFVFRFKAPLNEETVTERAILPYVLQSATEKLPSVIRLRQYLEELYGSSLAVD
VSKKGEEHIISIYMDVANEKYLQDAPPLFEKALSMLSDIVLHPATEGKGFLQSIVESEKRALLQRIEATYDDKMRYANER
LIEEMCKVEPYRLSSNGKKEDVPLITSEKLYQYYQKVLAEDEMDLYIIGDISDNAAELVRKYFSISPRVPKEKNVILHKR
NNEEKEVVEKQELKQSKLNIGYRTYVTYRDEDYFALQLFNGLFGGFSHSKLFVNVREKNSLAYYAASRFESHKGLLFVMS
GIEGKNYEKAVAIIKEQMKAMKNGDFSEEEIQQTKSVIRNQILEAIDTPRGFVELLYHGIIAEHTRPVEEWVTGIESVTK
EEIVKVANQIELDTIYFLHGTEGE
>Mature_424_residues
MKLMEQQMHELGGLRVHIIPTDKYKTNTFVFRFKAPLNEETVTERAILPYVLQSATEKLPSVIRLRQYLEELYGSSLAVD
VSKKGEEHIISIYMDVANEKYLQDAPPLFEKALSMLSDIVLHPATEGKGFLQSIVESEKRALLQRIEATYDDKMRYANER
LIEEMCKVEPYRLSSNGKKEDVPLITSEKLYQYYQKVLAEDEMDLYIIGDISDNAAELVRKYFSISPRVPKEKNVILHKR
NNEEKEVVEKQELKQSKLNIGYRTYVTYRDEDYFALQLFNGLFGGFSHSKLFVNVREKNSLAYYAASRFESHKGLLFVMS
GIEGKNYEKAVAIIKEQMKAMKNGDFSEEEIQQTKSVIRNQILEAIDTPRGFVELLYHGIIAEHTRPVEEWVTGIESVTK
EEIVKVANQIELDTIYFLHGTEGE

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 49000; Mature: 49000

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMEQQMHELGGLRVHIIPTDKYKTNTFVFRFKAPLNEETVTERAILPYVLQSATEKLP
CCCHHHHHHHHCCCEEEEEECCCEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SVIRLRQYLEELYGSSLAVDVSKKGEEHIISIYMDVANEKYLQDAPPLFEKALSMLSDIV
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHH
LHPATEGKGFLQSIVESEKRALLQRIEATYDDKMRYANERLIEEMCKVEPYRLSSNGKKE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
DVPLITSEKLYQYYQKVLAEDEMDLYIIGDISDNAAELVRKYFSISPRVPKEKNVILHKR
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECC
NNEEKEVVEKQELKQSKLNIGYRTYVTYRDEDYFALQLFNGLFGGFSHSKLFVNVREKNS
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCC
LAYYAASRFESHKGLLFVMSGIEGKNYEKAVAIIKEQMKAMKNGDFSEEEIQQTKSVIRN
EEEHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QILEAIDTPRGFVELLYHGIIAEHTRPVEEWVTGIESVTKEEIVKVANQIELDTIYFLHG
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
TEGE
CCCC
>Mature Secondary Structure
MKLMEQQMHELGGLRVHIIPTDKYKTNTFVFRFKAPLNEETVTERAILPYVLQSATEKLP
CCCHHHHHHHHCCCEEEEEECCCEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SVIRLRQYLEELYGSSLAVDVSKKGEEHIISIYMDVANEKYLQDAPPLFEKALSMLSDIV
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHH
LHPATEGKGFLQSIVESEKRALLQRIEATYDDKMRYANERLIEEMCKVEPYRLSSNGKKE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
DVPLITSEKLYQYYQKVLAEDEMDLYIIGDISDNAAELVRKYFSISPRVPKEKNVILHKR
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECC
NNEEKEVVEKQELKQSKLNIGYRTYVTYRDEDYFALQLFNGLFGGFSHSKLFVNVREKNS
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCC
LAYYAASRFESHKGLLFVMSGIEGKNYEKAVAIIKEQMKAMKNGDFSEEEIQQTKSVIRN
EEEHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QILEAIDTPRGFVELLYHGIIAEHTRPVEEWVTGIESVTKEEIVKVANQIELDTIYFLHG
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
TEGE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]