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The map label for this gene is ymfH [H]

Identifier: 152976152

GI number: 152976152

Start: 2529575

End: 2530861

Strand: Reverse

Name: ymfH [H]

Synonym: Bcer98_2438

Alternate gene names: 152976152

Gene position: 2530861-2529575 (Counterclockwise)

Preceding gene: 152976153

Following gene: 152976151

Centisome position: 61.92

GC content: 32.25

Gene sequence:

>1287_bases
ATGGAGAAGATTGCTTATGATCAATTACAAGAAACGCTTTATTATGAAAAGCTTCCAAATGGATTAGATGTATATATCTT
ACCGAAGCACGGATTCAATAAAACATTTGCAACGTTTACAACAAAGTACGGCTCTATCGATAATACATTCGTTCCTCTTG
GAAAAGAAGAGATGGTTCGGGTGCCAGATGGAATCGCTCATTTCCTTGAACATAAATTGTTTGAAAAAGAGGATCATGAC
GCATTTCAGTTGTTTAGTAAGCAAGGAGCATCTGCAAATGCATTTACATCCTTTACAAGAACAGCGTATCTTTTTTCATG
TACATCCAATGTGGAACAAAATTTAAATACATTATTAAATTTTGTTCAAGAACCATACTTTTCGGAAAAAACAGTGGAAA
AAGAAAAAGGCATTATTGGTCAAGAAATTCAAATGTATCAAGATAACCCAGATTGGCGTTTATACTTTGGGTTAATTGAT
AGTCTATTTGTGAAACATCCGATTAAAATTGATATCGCTGGAACAATTGAATCGATAAGCAAAATTACGAAAGATTTATT
GTATGAATGCTATGAAACATTTTATCATCCAAGTAATATGCTTTTATTTGTTGTTGGAGCTGTTGATCCAGAAAAGACAA
TCGCATTAGTACGAGAGAATCAAGCAAAAAAAGATTATCAAAATCAGCCAGAAATTATTCGTTCATTTGAAAGTGAACCA
GAAGAGGTAAATGAGAAAAAGAAAATTATTTCGATGTCTGTTCAAACGCCAAAATGTTTAGTAGGAATTAAAGCAGTAGG
GCTAAAAGAAAAAGGTGAGGCGCTTTTAAAACAAGAAATTGCACTGACGTTACTTTTAGATTACTTATTTGGAAAAGGAT
CAGCTCATTATGAGTCTTTATATAATGAAGGGCTCATTGACGAAACATTTTCTTATGATTATACAGAAGAGAGTAATTTT
GGGTTTGCGATGGTTGGAGGCGATACAAAACAGCCAGATGAATTAGCAGATCGATTGAAAGCCATTTTGTTGCAAATAGA
TTATAATAAGATTGATGCAAATACATTAGAACGTGTAAAGAAAAAGAAAATTGGAGGATTTTTACGCTCTCTTAATTCAC
CTGAATATATTGCAAATCAATTTACAAGATATGCATTTAATGAAACGAGTTTATTTGATGCATTATCTACTTTAGAAGGC
ATAACAGTTCAAGATTTACAAAGTGCAGCAAAAGAATTTTTAGTGGAAGACAGAATGAGTATTTGCCAAGTATTACCAAA
GAAATAA

Upstream 100 bases:

>100_bases
CACGGGAATAGAATCGGTTACGAAAGAAGAAATTGTGAAGGTCGCAAATCAAATTGAGTTAGATACGATTTACTTCTTAC
ATGGAACGGAGGGAGAATAG

Downstream 100 bases:

>100_bases
CATACAAACATGAGGGATCTGTTGTCTGTTATATAAAAATGAACCCCTTCTTACTTTTTAGTAAAGCTTAAAAAGTAAAG
AGGGGTATTTATAATGAAGA

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MEKIAYDQLQETLYYEKLPNGLDVYILPKHGFNKTFATFTTKYGSIDNTFVPLGKEEMVRVPDGIAHFLEHKLFEKEDHD
AFQLFSKQGASANAFTSFTRTAYLFSCTSNVEQNLNTLLNFVQEPYFSEKTVEKEKGIIGQEIQMYQDNPDWRLYFGLID
SLFVKHPIKIDIAGTIESISKITKDLLYECYETFYHPSNMLLFVVGAVDPEKTIALVRENQAKKDYQNQPEIIRSFESEP
EEVNEKKKIISMSVQTPKCLVGIKAVGLKEKGEALLKQEIALTLLLDYLFGKGSAHYESLYNEGLIDETFSYDYTEESNF
GFAMVGGDTKQPDELADRLKAILLQIDYNKIDANTLERVKKKKIGGFLRSLNSPEYIANQFTRYAFNETSLFDALSTLEG
ITVQDLQSAAKEFLVEDRMSICQVLPKK

Sequences:

>Translated_428_residues
MEKIAYDQLQETLYYEKLPNGLDVYILPKHGFNKTFATFTTKYGSIDNTFVPLGKEEMVRVPDGIAHFLEHKLFEKEDHD
AFQLFSKQGASANAFTSFTRTAYLFSCTSNVEQNLNTLLNFVQEPYFSEKTVEKEKGIIGQEIQMYQDNPDWRLYFGLID
SLFVKHPIKIDIAGTIESISKITKDLLYECYETFYHPSNMLLFVVGAVDPEKTIALVRENQAKKDYQNQPEIIRSFESEP
EEVNEKKKIISMSVQTPKCLVGIKAVGLKEKGEALLKQEIALTLLLDYLFGKGSAHYESLYNEGLIDETFSYDYTEESNF
GFAMVGGDTKQPDELADRLKAILLQIDYNKIDANTLERVKKKKIGGFLRSLNSPEYIANQFTRYAFNETSLFDALSTLEG
ITVQDLQSAAKEFLVEDRMSICQVLPKK
>Mature_428_residues
MEKIAYDQLQETLYYEKLPNGLDVYILPKHGFNKTFATFTTKYGSIDNTFVPLGKEEMVRVPDGIAHFLEHKLFEKEDHD
AFQLFSKQGASANAFTSFTRTAYLFSCTSNVEQNLNTLLNFVQEPYFSEKTVEKEKGIIGQEIQMYQDNPDWRLYFGLID
SLFVKHPIKIDIAGTIESISKITKDLLYECYETFYHPSNMLLFVVGAVDPEKTIALVRENQAKKDYQNQPEIIRSFESEP
EEVNEKKKIISMSVQTPKCLVGIKAVGLKEKGEALLKQEIALTLLLDYLFGKGSAHYESLYNEGLIDETFSYDYTEESNF
GFAMVGGDTKQPDELADRLKAILLQIDYNKIDANTLERVKKKKIGGFLRSLNSPEYIANQFTRYAFNETSLFDALSTLEG
ITVQDLQSAAKEFLVEDRMSICQVLPKK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Escherichia coli, GI1787770, Length=235, Percent_Identity=26.8085106382979, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71999683, Length=427, Percent_Identity=23.4192037470726, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 48907; Mature: 48907

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIAYDQLQETLYYEKLPNGLDVYILPKHGFNKTFATFTTKYGSIDNTFVPLGKEEMVR
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHEECCCCCCCCCCCCCHHHHHC
VPDGIAHFLEHKLFEKEDHDAFQLFSKQGASANAFTSFTRTAYLFSCTSNVEQNLNTLLN
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHH
FVQEPYFSEKTVEKEKGIIGQEIQMYQDNPDWRLYFGLIDSLFVKHPIKIDIAGTIESIS
HHHCCCCCHHHHHHHCCCCCCHHHEECCCCCCEEHHHHHHHHHHCCCEEEEECHHHHHHH
KITKDLLYECYETFYHPSNMLLFVVGAVDPEKTIALVRENQAKKDYQNQPEIIRSFESEP
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCHHHHHCCCCHHHHHHHCCCH
EEVNEKKKIISMSVQTPKCLVGIKAVGLKEKGEALLKQEIALTLLLDYLFGKGSAHYESL
HHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YNEGLIDETFSYDYTEESNFGFAMVGGDTKQPDELADRLKAILLQIDYNKIDANTLERVK
HCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
KKKIGGFLRSLNSPEYIANQFTRYAFNETSLFDALSTLEGITVQDLQSAAKEFLVEDRMS
HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ICQVLPKK
HHHHCCCC
>Mature Secondary Structure
MEKIAYDQLQETLYYEKLPNGLDVYILPKHGFNKTFATFTTKYGSIDNTFVPLGKEEMVR
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHEECCCCCCCCCCCCCHHHHHC
VPDGIAHFLEHKLFEKEDHDAFQLFSKQGASANAFTSFTRTAYLFSCTSNVEQNLNTLLN
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHH
FVQEPYFSEKTVEKEKGIIGQEIQMYQDNPDWRLYFGLIDSLFVKHPIKIDIAGTIESIS
HHHCCCCCHHHHHHHCCCCCCHHHEECCCCCCEEHHHHHHHHHHCCCEEEEECHHHHHHH
KITKDLLYECYETFYHPSNMLLFVVGAVDPEKTIALVRENQAKKDYQNQPEIIRSFESEP
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCHHHHHCCCCHHHHHHHCCCH
EEVNEKKKIISMSVQTPKCLVGIKAVGLKEKGEALLKQEIALTLLLDYLFGKGSAHYESL
HHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YNEGLIDETFSYDYTEESNFGFAMVGGDTKQPDELADRLKAILLQIDYNKIDANTLERVK
HCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
KKKIGGFLRSLNSPEYIANQFTRYAFNETSLFDALSTLEGITVQDLQSAAKEFLVEDRMS
HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ICQVLPKK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]