| Definition | Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome. |
|---|---|
| Accession | NC_009674 |
| Length | 4,087,024 |
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The map label for this gene is yokD [H]
Identifier: 152975754
GI number: 152975754
Start: 2102190
End: 2102999
Strand: Reverse
Name: yokD [H]
Synonym: Bcer98_2002
Alternate gene names: 152975754
Gene position: 2102999-2102190 (Counterclockwise)
Preceding gene: 152975755
Following gene: 152975753
Centisome position: 51.46
GC content: 39.01
Gene sequence:
>810_bases ATGATGAAAATAAATGATATAGTAGCGGAAACAGATTTCCCAAATACCATTGAAACGATCACAAATGATTTAAGGAAATT AGGGATACAGAAAGGAATGACAGTGATTGTACATTCTTCGCTTAGTTCAATAGGATGGGTGTGCGGTGGAGCAGTTGCGG TGGTGGAAGCATTAATGAACGTAATTACGGAAGAGGGAACGATTGTAATGCCAACGCAAACATCTGATTTGTCGGATCCA AAAAATTGGGCTCGACCACCAGTTCCAAAAAACTGGTGGTCCATAATTCGTGAGAATGTGCCTGCCTTTCATCCGGATAT TACTCCAACAAGAGCGATGGGGAAAATTGTAGAGTGTTTTCGTACATACCCAAATGTAAAGCGAAGTAGTCATCCGTTAA ATAGTTTCGCTGCTTGGGGGAAACATGCAGAATGGATTACAGCGGACCATTCACTGTCATTTAGTTTCGGTGAAGCATCT CCATTAAAGAAAATATATGATTTAGATGGATATGTATTATTAATAGGAGTTGGCTATGATTCGAATACATCTATTCATTT ATCAGAAATACGTGCTGGGGCGTGTGAATTTATAAAAGAAGGAGCGCCTATTATTGAAAATGGGGTTAGCGTCTGGAAAG AGTTTGATGAAATAGACTATGACCCTGAACCATTTGTTAAGATTGGGACAGAATTTGAACAAACAAATGCTGTTCAAATT GGAAAGATTGGAAATGCAACGTGCAGAGTCATGAAGCAGAGAGAGATTATCGATTATAGTACAGCGTGGCTTCGCTCGAA AAATAAGTAA
Upstream 100 bases:
>100_bases TAAGAATTTTATCTTCTAACAGATAAAAAATTAAGAAAAATATGATGAAATGTAAAATATGAGTTTATGTAAGATTTACG ATAAAATGACCGGAGGAATC
Downstream 100 bases:
>100_bases GGGATGATTCAAATGAAGGGGAAAAAGATAATAATTACAAGCGGTGGTTGTCTGGAAAAATGGGATCAAGTGCGCGGACA TACAAATTTAGCAAAAGGAA
Product: aminoglycoside N(3')-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMNVITEEGTIVMPTQTSDLSDP KNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECFRTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEAS PLKKIYDLDGYVLLIGVGYDSNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI GKIGNATCRVMKQREIIDYSTAWLRSKNK
Sequences:
>Translated_269_residues MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMNVITEEGTIVMPTQTSDLSDP KNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECFRTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEAS PLKKIYDLDGYVLLIGVGYDSNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI GKIGNATCRVMKQREIIDYSTAWLRSKNK >Mature_269_residues MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMNVITEEGTIVMPTQTSDLSDP KNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECFRTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEAS PLKKIYDLDGYVLLIGVGYDSNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI GKIGNATCRVMKQREIIDYSTAWLRSKNK
Specific function: May contribute to antibiotic resistance (Potential) [H]
COG id: COG2746
COG function: function code V; Aminoglycoside N3'-acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antibiotic N-acetyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003679 [H]
Pfam domain/function: PF02522 Antibiotic_NAT [H]
EC number: NA
Molecular weight: Translated: 29989; Mature: 29989
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMN CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHHHHHHHHH VITEEGTIVMPTQTSDLSDPKNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECF HHHCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH RTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEASPLKKIYDLDGYVLLIGVGYD HHCCCCCCCCCCHHHHHHHCCCCCEEECCCCEEECCCCCCHHHHHHCCCCEEEEEEECCC SNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI CCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEE GKIGNATCRVMKQREIIDYSTAWLRSKNK CCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMN CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHHHHHHHHH VITEEGTIVMPTQTSDLSDPKNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECF HHHCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH RTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEASPLKKIYDLDGYVLLIGVGYD HHCCCCCCCCCCHHHHHHHCCCCCEEECCCCEEECCCCCCHHHHHHCCCCEEEEEEECCC SNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI CCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEE GKIGNATCRVMKQREIIDYSTAWLRSKNK CCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]