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The map label for this gene is ycgF [H]

Identifier: 152975220

GI number: 152975220

Start: 1518809

End: 1519498

Strand: Direct

Name: ycgF [H]

Synonym: Bcer98_1423

Alternate gene names: 152975220

Gene position: 1518809-1519498 (Clockwise)

Preceding gene: 152975219

Following gene: 152975221

Centisome position: 37.16

GC content: 35.51

Gene sequence:

>690_bases
ATGGAATATACATTTCGTTTAGGAGTACATATAAAGGAGATGAGAGGAACCGTGATTAGCGTTCTTTTTAGTTACGTATT
GCTTGGGGGTTCTTTATCAGCACCAGTTGGTCCTATCAATGTTGCGCAAATAAATAAGGGAATAAAAAACGGATTTTTAA
GCGCATGGCTTGTAGGGGTAGGTGCGATGTTAGCTGATGTTATGATGATGTTTCTTATTTATTTTGGTGTCTCTACGTAT
TTAACAACATCTATTGCCAAATTAATGATTTGGGTATTCGGTTTTTTTACACTCTTGTATCTCGGTTATGAAAGTATAAG
AGATGCTTCTAAGCAGGTTGACAGTATAGAAAACGAGGAAAAAGAACATCCGATGAAATCATTTGCCGCTGGTTTTTTCA
TTGCAATTTCTAATCCGCTTAATATTGTATTTTGGATTGGAATCTACGGTGCAGTTTTAACAAGTGCGATTGGTACTGTA
GGTAAGGAAAAAGCTTTGCTATACAGCATTATGATATTTGTCGGGATTATGATTTGGGACTTATTTATGGCAACGACGAT
TCACTTCGGTAGAAAATTTGTTAATAATCGTATCATGAAATGGATTTCTCTTGCAGCAGGAATCATATTAGTTGGATTTG
GTATGTATTTTGGATATGAAGCTGTTCAAGGAGTTCAAAAACTCATGTAG

Upstream 100 bases:

>100_bases
TTGCAACACGGAATTCTGCTTTCAGAGTTACGGGATAGGTGAGTATTCTTTCTCTTTTTAAATTCAGGAAATTGTTAATT
TTCTGCGATGAAAGGATATA

Downstream 100 bases:

>100_bases
AAAAAAGGGATGCGGTGTGAAAGCTGCAATCCCTTTTCGTATATATGCATGTAAAATGTTGTATAAGAGTAAGTGTTCTA
TATAAAATGGGAATAGAAGA

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MEYTFRLGVHIKEMRGTVISVLFSYVLLGGSLSAPVGPINVAQINKGIKNGFLSAWLVGVGAMLADVMMMFLIYFGVSTY
LTTSIAKLMIWVFGFFTLLYLGYESIRDASKQVDSIENEEKEHPMKSFAAGFFIAISNPLNIVFWIGIYGAVLTSAIGTV
GKEKALLYSIMIFVGIMIWDLFMATTIHFGRKFVNNRIMKWISLAAGIILVGFGMYFGYEAVQGVQKLM

Sequences:

>Translated_229_residues
MEYTFRLGVHIKEMRGTVISVLFSYVLLGGSLSAPVGPINVAQINKGIKNGFLSAWLVGVGAMLADVMMMFLIYFGVSTY
LTTSIAKLMIWVFGFFTLLYLGYESIRDASKQVDSIENEEKEHPMKSFAAGFFIAISNPLNIVFWIGIYGAVLTSAIGTV
GKEKALLYSIMIFVGIMIWDLFMATTIHFGRKFVNNRIMKWISLAAGIILVGFGMYFGYEAVQGVQKLM
>Mature_229_residues
MEYTFRLGVHIKEMRGTVISVLFSYVLLGGSLSAPVGPINVAQINKGIKNGFLSAWLVGVGAMLADVMMMFLIYFGVSTY
LTTSIAKLMIWVFGFFTLLYLGYESIRDASKQVDSIENEEKEHPMKSFAAGFFIAISNPLNIVFWIGIYGAVLTSAIGTV
GKEKALLYSIMIFVGIMIWDLFMATTIHFGRKFVNNRIMKWISLAAGIILVGFGMYFGYEAVQGVQKLM

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 25430; Mature: 25430

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYTFRLGVHIKEMRGTVISVLFSYVLLGGSLSAPVGPINVAQINKGIKNGFLSAWLVGV
CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GAMLADVMMMFLIYFGVSTYLTTSIAKLMIWVFGFFTLLYLGYESIRDASKQVDSIENEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
KEHPMKSFAAGFFIAISNPLNIVFWIGIYGAVLTSAIGTVGKEKALLYSIMIFVGIMIWD
HHCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LFMATTIHFGRKFVNNRIMKWISLAAGIILVGFGMYFGYEAVQGVQKLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEYTFRLGVHIKEMRGTVISVLFSYVLLGGSLSAPVGPINVAQINKGIKNGFLSAWLVGV
CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GAMLADVMMMFLIYFGVSTYLTTSIAKLMIWVFGFFTLLYLGYESIRDASKQVDSIENEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
KEHPMKSFAAGFFIAISNPLNIVFWIGIYGAVLTSAIGTVGKEKALLYSIMIFVGIMIWD
HHCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LFMATTIHFGRKFVNNRIMKWISLAAGIILVGFGMYFGYEAVQGVQKLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]