Click here to switch to the map view.

The map label for this gene is yjiN [H]

Identifier: 152975219

GI number: 152975219

Start: 1517330

End: 1518577

Strand: Direct

Name: yjiN [H]

Synonym: Bcer98_1421

Alternate gene names: 152975219

Gene position: 1517330-1518577 (Clockwise)

Preceding gene: 152975217

Following gene: 152975220

Centisome position: 37.13

GC content: 35.58

Gene sequence:

>1248_bases
ATGTCATTACAATCAAAATATATAGCAGGAATTTCTCTTGGTGTGATGGGAATTGGATTTGTTGCTACTATTCCGTTTCA
ACATGTAGTAGCAGGAGAAATTATGCAAGGTGGTTTTGAAGCAGGGTTAGTAGGGGGACTCGCTGACTGGTTTGCGGTTA
CCGCTTTATTTCGTCATCCGATGGGACTTCCTATTCCGCATACAGCGCTTTTACCGAAAAATCGCAAACGTATGACAAAA
GGTCTTGTTACAACATTAGAAAATGATTGGCTGACAAAGGAAAGTATTACAAGCAAACTGAAAGAGTTGCAGTTAACACA
AATGGTACTACAAATTGCAGAAAGAGAACTGCAATCAGAAACGGTCAAAAAAGGATTTGTTACGATTATTGAAAAAGCGA
TTCGGCAAATGAATACAGAAAAACTTGCTGTTATTGTAGAAAAAGAATTAAAAACATACTTGCATACAATCGATACAGGA
AATATACTGCAAATTTTAATGGATCAACTCGTAAGGCAAGAATATGATGAGAAGGCGCTTGATTATATGTTAGCGAAAGC
AAAGGAATGGACCGCGCAAGATGAAGCGCGGTATCAGCTTGGAAGCTTAGGGATGAAAGCGATGGAAAATATAAAAGTAG
ATGGCTTTTTGCAGTTCACATTAAAGTCATTTCTGAACATTGTCGATGAAGAAAAAATCGGAAATATATTGCAGAAATTT
GTCATAAGTAACATTCATAGTTTGCAAAATCCTCATAATCGTACGAGACAGCTTATCATAATGAAAATGCGTGAGGAGTT
CGTTCAAGTAAAAGAAAATGAAGCAGTATTACAGGAGTTACAAAAATGGAAAGAAACGTGGATTGCGAACTGGAATGCAG
CTGAAAAAATAAAAGAACTATTAGACCAAGTACAAGAAAGAGCAGTAACTTTTATTAAAAAAGAAGAATTTACAGATCAG
TATTTGTTGCCGTTTATGATGAAGCAGCTCAATAAAATAAAAGAAGATGCAGAAGTAGTGCAAAAAATGGAGAATTGGTT
GCAAAAGCAAATTGTGAAACTTGTGGAAAACAATCATTCAAAAATTGGACAACTTGTGCAAGAGAACTTAGACAAATTAG
ATGATCAAACACTTATTACAATGATTGAGAAAAATGTAGGGAAAGATTTGCAATGGATTCGTGTCAATGGTGCTGTATGT
GGCTTTGTAATTGGACTTGTGATAGAAGGGGTCAAAGCTTTCGTATAA

Upstream 100 bases:

>100_bases
CTTTGTTATTTTTAAAGAGGTTCTTTATAGTATATATATGGACTTTTACAGATAATGATGGAACAAATTTTTCAGTTTAC
ATAAAGAGGGTGTGTGTACA

Downstream 100 bases:

>100_bases
AGGAGAGCTTCAGTGATTCTACCAACATGCTTAATCGCTGGATATTATTTTCCGATTGAAGTTATGCCGACAACAGTAAA
AAAATAGCTGCATGTCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSLQSKYIAGISLGVMGIGFVATIPFQHVVAGEIMQGGFEAGLVGGLADWFAVTALFRHPMGLPIPHTALLPKNRKRMTK
GLVTTLENDWLTKESITSKLKELQLTQMVLQIAERELQSETVKKGFVTIIEKAIRQMNTEKLAVIVEKELKTYLHTIDTG
NILQILMDQLVRQEYDEKALDYMLAKAKEWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFLNIVDEEKIGNILQKF
VISNIHSLQNPHNRTRQLIIMKMREEFVQVKENEAVLQELQKWKETWIANWNAAEKIKELLDQVQERAVTFIKKEEFTDQ
YLLPFMMKQLNKIKEDAEVVQKMENWLQKQIVKLVENNHSKIGQLVQENLDKLDDQTLITMIEKNVGKDLQWIRVNGAVC
GFVIGLVIEGVKAFV

Sequences:

>Translated_415_residues
MSLQSKYIAGISLGVMGIGFVATIPFQHVVAGEIMQGGFEAGLVGGLADWFAVTALFRHPMGLPIPHTALLPKNRKRMTK
GLVTTLENDWLTKESITSKLKELQLTQMVLQIAERELQSETVKKGFVTIIEKAIRQMNTEKLAVIVEKELKTYLHTIDTG
NILQILMDQLVRQEYDEKALDYMLAKAKEWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFLNIVDEEKIGNILQKF
VISNIHSLQNPHNRTRQLIIMKMREEFVQVKENEAVLQELQKWKETWIANWNAAEKIKELLDQVQERAVTFIKKEEFTDQ
YLLPFMMKQLNKIKEDAEVVQKMENWLQKQIVKLVENNHSKIGQLVQENLDKLDDQTLITMIEKNVGKDLQWIRVNGAVC
GFVIGLVIEGVKAFV
>Mature_414_residues
SLQSKYIAGISLGVMGIGFVATIPFQHVVAGEIMQGGFEAGLVGGLADWFAVTALFRHPMGLPIPHTALLPKNRKRMTKG
LVTTLENDWLTKESITSKLKELQLTQMVLQIAERELQSETVKKGFVTIIEKAIRQMNTEKLAVIVEKELKTYLHTIDTGN
ILQILMDQLVRQEYDEKALDYMLAKAKEWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFLNIVDEEKIGNILQKFV
ISNIHSLQNPHNRTRQLIIMKMREEFVQVKENEAVLQELQKWKETWIANWNAAEKIKELLDQVQERAVTFIKKEEFTDQY
LLPFMMKQLNKIKEDAEVVQKMENWLQKQIVKLVENNHSKIGQLVQENLDKLDDQTLITMIEKNVGKDLQWIRVNGAVCG
FVIGLVIEGVKAFV

Specific function: Unknown

COG id: COG2733

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790793, Length=421, Percent_Identity=20.9026128266033, Blast_Score=79, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007383 [H]

Pfam domain/function: PF04286 DUF445 [H]

EC number: NA

Molecular weight: Translated: 47556; Mature: 47425

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLQSKYIAGISLGVMGIGFVATIPFQHVVAGEIMQGGFEAGLVGGLADWFAVTALFRHP
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
MGLPIPHTALLPKNRKRMTKGLVTTLENDWLTKESITSKLKELQLTQMVLQIAERELQSE
CCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVKKGFVTIIEKAIRQMNTEKLAVIVEKELKTYLHTIDTGNILQILMDQLVRQEYDEKAL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DYMLAKAKEWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFLNIVDEEKIGNILQKF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISNIHSLQNPHNRTRQLIIMKMREEFVQVKENEAVLQELQKWKETWIANWNAAEKIKEL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LDQVQERAVTFIKKEEFTDQYLLPFMMKQLNKIKEDAEVVQKMENWLQKQIVKLVENNHS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KIGQLVQENLDKLDDQTLITMIEKNVGKDLQWIRVNGAVCGFVIGLVIEGVKAFV
HHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]