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The map label for this gene is intD [C]

Identifier: 152974798

GI number: 152974798

Start: 1109544

End: 1109909

Strand: Direct

Name: intD [C]

Synonym: Bcer98_0993

Alternate gene names: 152974798

Gene position: 1109544-1109909 (Clockwise)

Preceding gene: 152974796

Following gene: 152974802

Centisome position: 27.15

GC content: 37.43

Gene sequence:

>366_bases
TTGCCTGCATCAACAGTAGTAAAGCTAAAGAAACATAGAGCAGTCGTATTGAAAGAGAAGCTGACTCAAGGTGAGGAATA
CCAAGACAATGACTTGGTAATGTGTACTCCTTCTGGAACACCAATTAACCCTGCTAATTTAAGGAGAAGTTTAAACGCTT
TGATTAAGAAAGCAGCTGTTCCAAAGATTCGCTTTCATGATTTACGTCATACCCATGCGACTTTACTATTAGCTAAAGGT
GTGAATGTGAAGGTAATTTCCGAGCGTTTAGGACACAGTAATATCAAAATCACATTAGACACTTATTCGCATGTACTGCC
AACGATGCAAGAAGATGTAGTTAATAAAATAGAAGAGATTTTGTAG

Upstream 100 bases:

>100_bases
GCTCTTGTAACTGGGGGGTGCTCAGTTGAATTGCTAGGGCTATGATGGAAAGACGTTCTTACTTGGAGGAAAGACGAAAT
CAAGTTTAAGAAAGATACTA

Downstream 100 bases:

>100_bases
GTAATGTGACCAAACTTGTGATCACGACTCCTTTTGAATACAAGTTTACAAAAGAAAAAAACGCATCAAACGTTGATTTG
ACACGGTTTCTATCAGTATG

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MPASTVVKLKKHRAVVLKEKLTQGEEYQDNDLVMCTPSGTPINPANLRRSLNALIKKAAVPKIRFHDLRHTHATLLLAKG
VNVKVISERLGHSNIKITLDTYSHVLPTMQEDVVNKIEEIL

Sequences:

>Translated_121_residues
MPASTVVKLKKHRAVVLKEKLTQGEEYQDNDLVMCTPSGTPINPANLRRSLNALIKKAAVPKIRFHDLRHTHATLLLAKG
VNVKVISERLGHSNIKITLDTYSHVLPTMQEDVVNKIEEIL
>Mature_120_residues
PASTVVKLKKHRAVVLKEKLTQGEEYQDNDLVMCTPSGTPINPANLRRSLNALIKKAAVPKIRFHDLRHTHATLLLAKGV
NVKVISERLGHSNIKITLDTYSHVLPTMQEDVVNKIEEIL

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 13553; Mature: 13422

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASTVVKLKKHRAVVLKEKLTQGEEYQDNDLVMCTPSGTPINPANLRRSLNALIKKAAV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCC
PKIRFHDLRHTHATLLLAKGVNVKVISERLGHSNIKITLDTYSHVLPTMQEDVVNKIEEI
CCHHHHHHHHHHHHHHEECCCCEEEHHHHCCCCCEEEEECCHHHHCCCHHHHHHHHHHHH
L
C
>Mature Secondary Structure 
PASTVVKLKKHRAVVLKEKLTQGEEYQDNDLVMCTPSGTPINPANLRRSLNALIKKAAV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCC
PKIRFHDLRHTHATLLLAKGVNVKVISERLGHSNIKITLDTYSHVLPTMQEDVVNKIEEI
CCHHHHHHHHHHHHHHEECCCCEEEHHHHCCCCCEEEEECCHHHHCCCHHHHHHHHHHHH
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]