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The map label for this gene is csoR [H]

Identifier: 152974348

GI number: 152974348

Start: 592456

End: 592626

Strand: Direct

Name: csoR [H]

Synonym: Bcer98_0517

Alternate gene names: 152974348

Gene position: 592456-592626 (Clockwise)

Preceding gene: 152974346

Following gene: 152974349

Centisome position: 14.5

GC content: 32.75

Gene sequence:

>171_bases
GTGAATCAAGAAAAGATGGTACCTAGAACAGATGAAGAAATTGAAAAAGTTGTAAATCGTTTAAAAAGAATTGAAGGCCA
AGTGAGGGGCATTCAAAAGATGATGGAAGATAATCGCTATTGTATTGATGTATTCATTCAAATTTCTGCAGTGCAAAGCA
ACGTTAAATAA

Upstream 100 bases:

>100_bases
ATTTGTTGTAAAATACATAGTTTTTATTTTAAAAATTTGCAACATTATACCCCTTACGGGTATAATATATAAGGGGAGGG
GGTATGTTGGTGGCCATTGC

Downstream 100 bases:

>100_bases
AGTTCGTTTTTCATTGTTAGAACGTTATGCAAATCGTTGTATAAAAAAGCTGTTCAAGAAGGAAATGGGGATGTATTTAT
AAAAGAGTTTTAATGAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MNQEKMVPRTDEEIEKVVNRLKRIEGQVRGIQKMMEDNRYCIDVFIQISAVQSNVK

Sequences:

>Translated_56_residues
MNQEKMVPRTDEEIEKVVNRLKRIEGQVRGIQKMMEDNRYCIDVFIQISAVQSNVK
>Mature_56_residues
MNQEKMVPRTDEEIEKVVNRLKRIEGQVRGIQKMMEDNRYCIDVFIQISAVQSNVK

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 6639; Mature: 6639

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQEKMVPRTDEEIEKVVNRLKRIEGQVRGIQKMMEDNRYCIDVFIQISAVQSNVK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQEKMVPRTDEEIEKVVNRLKRIEGQVRGIQKMMEDNRYCIDVFIQISAVQSNVK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]