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The map label for this gene is yhbA [H]

Identifier: 152974301

GI number: 152974301

Start: 529442

End: 530584

Strand: Direct

Name: yhbA [H]

Synonym: Bcer98_0468

Alternate gene names: 152974301

Gene position: 529442-530584 (Clockwise)

Preceding gene: 152974300

Following gene: 152974302

Centisome position: 12.95

GC content: 37.71

Gene sequence:

>1143_bases
ATGGATTTTGAGAAATTAAAGCAAGATGTAATAGCGTATAGTAAAACGATTGGAATCGATAAAATAGGGTTTGCAAGTGC
TTCTCCTTTTGAAGAATTGAAGCAGCGTTTAATTCAGCAGCAACAATTAAATTATCAATCTGGTTTTGAAGAACCTGATA
TTGAGAAGAGAACAAATCCACAGCTATTATTACCAGGGGCAAAATCAATTATTGCGATTGCATTAGCTTATCCATCAAAA
CTAAAAAATGCACCGCTAAGTAAGAGAGGAGAGAGACGAGGCATTTTTTGTCGCGCGTCTTGGGGACAAGATTATCATCT
TGTTTTACGAGACCGTTTGAAAAAGTTAGAGACGTATTTAATCGAAAAGCTACCTGGTATAGAAGTAAAATCAATGGTTG
ATACAGGAGAATTAAGTGATCGTGCTGTTTCAGAACGTGCTGGTATCGGGTGGAGTGGAAAAAACTGCTCGATTATTACT
CCAGAATTTGGTTCTTATGTATATTTAGGTGAAATGATTACGAATGTCCCGTTTCCTCCTGATCAGCCTATAGAAGATCA
GTGTGGAAGTTGTACAAAATGCATTGATATTTGTCCAACTGGAGCTTTAGTACAAGGGGGACAATTAAATGCAAAGAAAT
GTATTGCTTTTTTAACACAGACAAAAGGATTCTTGCCAGAAGAATATCGGGATAAGATAGGAAACAGAATATATGGGTGC
GATACATGTCAAACTGTCTGTCCAAAGAATAAAGGGAAAGACTTCCATAATCATCCCGAAATGGAACCAGATCCAGAATT
AGTTAAACCACTATTAATACCGTTATTAACAATAAGTAATCGAGAGTTTAAAGAAAAATATGGGATAATGTCTGGATCAT
GGCGAGGAAAGAAACCGTTGCAGCGAAATGCAATTTTAGCACTTGCTCATTTTAAAGAAACAGCAGCAGTACCACACTTA
ATTGATGTAATGAAAGATGATCCAAGGCCTGTTATACGAGGAACAGCGGCATGGGCTCTTGGGAAAATTGGCGGTGATGG
AGTAGGTGTTGCTATTGAACGTGCAATGGAGCGTGAGAAGGATGAAGAAGTTCTTCATGAAATGAAGCGTGGACTTGAAT
TATTAGCACAGAAAAAAGAGTAG

Upstream 100 bases:

>100_bases
TATTTTATGCAAGAATAGAATGAACGAATATGATTATGAAATGAATTGCTAACCAACGGTAGATGATTCAATATATATTC
ATCGTAGAAGGAGGCAAAGC

Downstream 100 bases:

>100_bases
ATAATATTCCCCTGTTTCATATTGTAATATGGGGAGGGGAGAAAATGACTGTAAAATCTTACATTGAAAAACAGATACAA
CAATCTTTAGCATTTATAGT

Product: putative iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MDFEKLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNPQLLLPGAKSIIAIALAYPSK
LKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLKKLETYLIEKLPGIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIIT
PEFGSYVYLGEMITNVPFPPDQPIEDQCGSCTKCIDICPTGALVQGGQLNAKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
DTCQTVCPKNKGKDFHNHPEMEPDPELVKPLLIPLLTISNREFKEKYGIMSGSWRGKKPLQRNAILALAHFKETAAVPHL
IDVMKDDPRPVIRGTAAWALGKIGGDGVGVAIERAMEREKDEEVLHEMKRGLELLAQKKE

Sequences:

>Translated_380_residues
MDFEKLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNPQLLLPGAKSIIAIALAYPSK
LKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLKKLETYLIEKLPGIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIIT
PEFGSYVYLGEMITNVPFPPDQPIEDQCGSCTKCIDICPTGALVQGGQLNAKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
DTCQTVCPKNKGKDFHNHPEMEPDPELVKPLLIPLLTISNREFKEKYGIMSGSWRGKKPLQRNAILALAHFKETAAVPHL
IDVMKDDPRPVIRGTAAWALGKIGGDGVGVAIERAMEREKDEEVLHEMKRGLELLAQKKE
>Mature_380_residues
MDFEKLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNPQLLLPGAKSIIAIALAYPSK
LKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLKKLETYLIEKLPGIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIIT
PEFGSYVYLGEMITNVPFPPDQPIEDQCGSCTKCIDICPTGALVQGGQLNAKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
DTCQTVCPKNKGKDFHNHPEMEPDPELVKPLLIPLLTISNREFKEKYGIMSGSWRGKKPLQRNAILALAHFKETAAVPHL
IDVMKDDPRPVIRGTAAWALGKIGGDGVGVAIERAMEREKDEEVLHEMKRGLELLAQKKE

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=351, Percent_Identity=31.3390313390313, Blast_Score=191, Evalue=9e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42485; Mature: 42485

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFEKLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QLLLPGAKSIIAIALAYPSKLKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLKKLETYL
CEECCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
IEKLPGIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIITPEFGSYVYLGEMITNVPFPP
HHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEHHHHHCCCCCC
DQPIEDQCGSCTKCIDICPTGALVQGGQLNAKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
CCCHHHHHCCHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCEEECC
DTCQTVCPKNKGKDFHNHPEMEPDPELVKPLLIPLLTISNREFKEKYGIMSGSWRGKKPL
CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC
QRNAILALAHFKETAAVPHLIDVMKDDPRPVIRGTAAWALGKIGGDGVGVAIERAMEREK
HHHHEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCH
DEEVLHEMKRGLELLAQKKE
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFEKLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QLLLPGAKSIIAIALAYPSKLKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLKKLETYL
CEECCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
IEKLPGIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIITPEFGSYVYLGEMITNVPFPP
HHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEHHHHHCCCCCC
DQPIEDQCGSCTKCIDICPTGALVQGGQLNAKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
CCCHHHHHCCHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCEEECC
DTCQTVCPKNKGKDFHNHPEMEPDPELVKPLLIPLLTISNREFKEKYGIMSGSWRGKKPL
CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC
QRNAILALAHFKETAAVPHLIDVMKDDPRPVIRGTAAWALGKIGGDGVGVAIERAMEREK
HHHHEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCH
DEEVLHEMKRGLELLAQKKE
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]