Definition Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome.
Accession NC_009674
Length 4,087,024

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The map label for this gene is bdbD [H]

Identifier: 152974300

GI number: 152974300

Start: 528402

End: 529055

Strand: Direct

Name: bdbD [H]

Synonym: Bcer98_0467

Alternate gene names: 152974300

Gene position: 528402-529055 (Clockwise)

Preceding gene: 152974299

Following gene: 152974301

Centisome position: 12.93

GC content: 31.8

Gene sequence:

>654_bases
ATGAAATCATCGAACAAAATCATGATTCTTGGTATTGTTTTTTCTATTGCTGTATTAATTGTTATTGGAACAATTGTGTA
CAGTATTATAAATGACAAAAAAGAAAAAGGAAATGAGATGTTTGCTTATTCTACTCAACAAGCTTTAGGGAAAGAAGATG
CTCCTGTGAAAGTTGTTGAATTTGGAGACTTCAAATGCCCAGCTTGTCGAACTTGGGATGCAACAGTATTTCCTCGTTTA
AAAGAAGATTATATTAATAAAGGAAAAGTGCAGTTTTATTTTATTAACTTCCCATTTATCGGAAAAGATTCTGAATTAGG
TGCTGCAGCTGGTGAGGCAATTTATAAACAAGATCCAGATTCTTTCTGGAAATTCTATGATGAAATTTATCAAAGTCAGA
AAAAAGATACTGAGGAATGGATTACAGAAGAACTGCTTCTGAACATAGTGAAGGAAAAACTTCCAAAAGTGAATGTAGAA
CAGTTTAAGAAGGATTTACACAGTAAGGAAATGAAAGAAAAAGTACGTAAAGATTTTGATCGTGCAGAAAAACTAAAAGT
ACAAGGTGCACCATCGGTATATGTAAACGGAAATCTTACAAATCCTGATTATGACAGTATGAAAAAGGAAATTGATAAAG
AATTGAAAAAGTGA

Upstream 100 bases:

>100_bases
TTTATGTGAGCGTGTTCATTGCATGACTGATATAAGTATTGATATTATGTGTATTGTGTACAGCAATGTACATAGAATAT
GAAATTAAAGAGGAATGCAT

Downstream 100 bases:

>100_bases
TGAGACCCCTCATCACTTTTTCGACTTTTTTCGATAAAATTATTGCATAGGCTTTTATTACGTGCTATACTACTTTACAT
AAGTTATTGAAATAACTTAT

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: Disulfide oxidoreductase D; Thiol-disulfide oxidoreductase D [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKSSNKIMILGIVFSIAVLIVIGTIVYSIINDKKEKGNEMFAYSTQQALGKEDAPVKVVEFGDFKCPACRTWDATVFPRL
KEDYINKGKVQFYFINFPFIGKDSELGAAAGEAIYKQDPDSFWKFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVNVE
QFKKDLHSKEMKEKVRKDFDRAEKLKVQGAPSVYVNGNLTNPDYDSMKKEIDKELKK

Sequences:

>Translated_217_residues
MKSSNKIMILGIVFSIAVLIVIGTIVYSIINDKKEKGNEMFAYSTQQALGKEDAPVKVVEFGDFKCPACRTWDATVFPRL
KEDYINKGKVQFYFINFPFIGKDSELGAAAGEAIYKQDPDSFWKFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVNVE
QFKKDLHSKEMKEKVRKDFDRAEKLKVQGAPSVYVNGNLTNPDYDSMKKEIDKELKK
>Mature_217_residues
MKSSNKIMILGIVFSIAVLIVIGTIVYSIINDKKEKGNEMFAYSTQQALGKEDAPVKVVEFGDFKCPACRTWDATVFPRL
KEDYINKGKVQFYFINFPFIGKDSELGAAAGEAIYKQDPDSFWKFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVNVE
QFKKDLHSKEMKEKVRKDFDRAEKLKVQGAPSVYVNGNLTNPDYDSMKKEIDKELKK

Specific function: May be required for disulfide bond formation in some proteins [H]

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioredoxin family. DsbA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 25049; Mature: 25049

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSNKIMILGIVFSIAVLIVIGTIVYSIINDKKEKGNEMFAYSTQQALGKEDAPVKVVE
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCCCCCEEEEE
FGDFKCPACRTWDATVFPRLKEDYINKGKVQFYFINFPFIGKDSELGAAAGEAIYKQDPD
CCCCCCCCCCCCCCHHCCHHHHHHCCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCHH
SFWKFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVNVEQFKKDLHSKEMKEKVRKDFD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAEKLKVQGAPSVYVNGNLTNPDYDSMKKEIDKELKK
HHHHEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSSNKIMILGIVFSIAVLIVIGTIVYSIINDKKEKGNEMFAYSTQQALGKEDAPVKVVE
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCCCCCEEEEE
FGDFKCPACRTWDATVFPRLKEDYINKGKVQFYFINFPFIGKDSELGAAAGEAIYKQDPD
CCCCCCCCCCCCCCHHCCHHHHHHCCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCHH
SFWKFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVNVEQFKKDLHSKEMKEKVRKDFD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAEKLKVQGAPSVYVNGNLTNPDYDSMKKEIDKELKK
HHHHEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]