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The map label for this gene is yugT [H]

Identifier: 152974190

GI number: 152974190

Start: 403158

End: 404822

Strand: Direct

Name: yugT [H]

Synonym: Bcer98_0354

Alternate gene names: 152974190

Gene position: 403158-404822 (Clockwise)

Preceding gene: 152974189

Following gene: 152974191

Centisome position: 9.86

GC content: 34.41

Gene sequence:

>1665_bases
ATGAATAAAATATGGTGGAAAGAAGCTGTCGCTTATCAAATTTACCCACGTAGCTTTATGGATTCAAATGGTGATGGTAT
TGGAGATTTACAAGGTATTATAGCAAAGCTTGATTATTTAAAAGATTTAGGGATAGATGTTATTTGGATTTGTCCAATGT
ATAAATCACCAAACGATGATAATGGTTATGATATTAGTGACTATCGCGAAATTATGGATGAGTTCGGTACAATGGCAGAC
TTTGATGCATTACTAGAAGAAGTGCATAAGCGCGGTATGAAATTAATTATTGATTTGGTTATTAATCATACAAGTGATGA
ACATCCTTGGTTTATTGAATCGCGATCATCTAAGGATAATCCAAAACGCGATTGGTATATTTGGCGTGATGGTAAGGATG
GAAAAGAGCCGAATAACTGGGAAAGTATTTTTAATGGTTCTGCTTGGGAATATGATGAGACAACAGACCAATATTACTTA
CACATATTCTCACGGAAACAGCCGGATTTAAATTGGGAGAATAAAGAGGTTCGCGAAGCTTTATATGAGACAGTGAACTG
GTGGTTAGATAAGGGAATAGATGGATTTCGTGTTGATGCGATTAGTCATATTAAGAAAGAAGAAGGACTAAAAGACATGC
CAAATCCCAAAGGGTTACCTTATGTATCTTCTTTTGATAAACATATGAATGTGAATGGTATTCAGCCGTTATTAGAGGAA
CTAAAAGAGAATACATTTGCAAAATACGATATTATGACTGTTGGAGAAGCGAATGGTGTCAAAATTGAAGATGCAGATCT
TTGGGTTGGAGAGGAAAACGGTAAATTCAATATGGTATTTCAATTTGAACATTTAAGTTTATGGGATGCTGAAAAGAAAA
AAGAACTTGATGTTGTAGAGTTGAAGAAAGTGTTAACAAAATGGCAAAAAGGTTTAGAAAATAAAGGGTGGAACGCACTT
TATATTGAAAACCATGATAAGCCACGTATTGTATCGACTTGGGGAGACGATCAGCAATATTGGCGTGAAAGTGCAACAGC
TTTAGGAGCGATGTATTTCTTTATGCATGGAACGCCATTTATTTATCAAGGGCAAGAGATTGGGATGACAAATGTTCAGT
TTCCTAATATCGATGATTATGACGATGTAGCTATTAAAAATTTATACCGTGAGAAAATTGCACAAGGTGTATCGCATCAA
GAAATGATGGAAATTATATGGGCATCTTGTCGCGATAATTCGCGTACACCTATGCAGTGGAGTAGCGAAGAAAATGCAGG
TTTTACAACAGGAACACCTTGGTTTGGAATCAATCCAAATTATAAAGAAATCAATGTCCAAAAGCAGCAAGAAGAACCCA
ATTCTATTTTGAATTTTTATAAGAAAATGATTGCTCTAAAAAAGGCACATGCTGTTTTCAATTACGGTACGTATGATTTA
TTATTAGAGGATGATCCGCAAATTTATGCATACACGCGTACATTACAAGATGAAAAAATAATTGTGATTACCAATCTGTC
AAGCAAGGAAGCTATCTATCATAAGAATTCATACACGTTAGAAAGCAATCGATTGCTTTTAAGTAACTATGAAATTTCTG
AAGATGAAGGAAATAAGAAAATCATCTTAAATCCTTATGAAGCAAGAATTTATCGTATTTCTTAA

Upstream 100 bases:

>100_bases
TAAGATGAAAATTATCGTTGCAAACTTGATATATTTTGTTATGATAGTGTTACGAAAACGTTTGCATAAAAAAAGAGGGA
TATAGAAGGAGAGCGCTATT

Downstream 100 bases:

>100_bases
AAAAATGGTGCTCTCGTAGCATCTTTTTTTGTTTAGAAAAAACTTTTTATTGCAATGCGAAAGCGCTTTTATTAAAATTA
ATTTATGAAAACGTTTGCGT

Product: alpha amylase catalytic region

Products: NA

Alternate protein names: Oligosaccharide alpha-1,6-glucosidase 3; Sucrase-isomaltase 3; Isomaltase 3 [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MNKIWWKEAVAYQIYPRSFMDSNGDGIGDLQGIIAKLDYLKDLGIDVIWICPMYKSPNDDNGYDISDYREIMDEFGTMAD
FDALLEEVHKRGMKLIIDLVINHTSDEHPWFIESRSSKDNPKRDWYIWRDGKDGKEPNNWESIFNGSAWEYDETTDQYYL
HIFSRKQPDLNWENKEVREALYETVNWWLDKGIDGFRVDAISHIKKEEGLKDMPNPKGLPYVSSFDKHMNVNGIQPLLEE
LKENTFAKYDIMTVGEANGVKIEDADLWVGEENGKFNMVFQFEHLSLWDAEKKKELDVVELKKVLTKWQKGLENKGWNAL
YIENHDKPRIVSTWGDDQQYWRESATALGAMYFFMHGTPFIYQGQEIGMTNVQFPNIDDYDDVAIKNLYREKIAQGVSHQ
EMMEIIWASCRDNSRTPMQWSSEENAGFTTGTPWFGINPNYKEINVQKQQEEPNSILNFYKKMIALKKAHAVFNYGTYDL
LLEDDPQIYAYTRTLQDEKIIVITNLSSKEAIYHKNSYTLESNRLLLSNYEISEDEGNKKIILNPYEARIYRIS

Sequences:

>Translated_554_residues
MNKIWWKEAVAYQIYPRSFMDSNGDGIGDLQGIIAKLDYLKDLGIDVIWICPMYKSPNDDNGYDISDYREIMDEFGTMAD
FDALLEEVHKRGMKLIIDLVINHTSDEHPWFIESRSSKDNPKRDWYIWRDGKDGKEPNNWESIFNGSAWEYDETTDQYYL
HIFSRKQPDLNWENKEVREALYETVNWWLDKGIDGFRVDAISHIKKEEGLKDMPNPKGLPYVSSFDKHMNVNGIQPLLEE
LKENTFAKYDIMTVGEANGVKIEDADLWVGEENGKFNMVFQFEHLSLWDAEKKKELDVVELKKVLTKWQKGLENKGWNAL
YIENHDKPRIVSTWGDDQQYWRESATALGAMYFFMHGTPFIYQGQEIGMTNVQFPNIDDYDDVAIKNLYREKIAQGVSHQ
EMMEIIWASCRDNSRTPMQWSSEENAGFTTGTPWFGINPNYKEINVQKQQEEPNSILNFYKKMIALKKAHAVFNYGTYDL
LLEDDPQIYAYTRTLQDEKIIVITNLSSKEAIYHKNSYTLESNRLLLSNYEISEDEGNKKIILNPYEARIYRIS
>Mature_554_residues
MNKIWWKEAVAYQIYPRSFMDSNGDGIGDLQGIIAKLDYLKDLGIDVIWICPMYKSPNDDNGYDISDYREIMDEFGTMAD
FDALLEEVHKRGMKLIIDLVINHTSDEHPWFIESRSSKDNPKRDWYIWRDGKDGKEPNNWESIFNGSAWEYDETTDQYYL
HIFSRKQPDLNWENKEVREALYETVNWWLDKGIDGFRVDAISHIKKEEGLKDMPNPKGLPYVSSFDKHMNVNGIQPLLEE
LKENTFAKYDIMTVGEANGVKIEDADLWVGEENGKFNMVFQFEHLSLWDAEKKKELDVVELKKVLTKWQKGLENKGWNAL
YIENHDKPRIVSTWGDDQQYWRESATALGAMYFFMHGTPFIYQGQEIGMTNVQFPNIDDYDDVAIKNLYREKIAQGVSHQ
EMMEIIWASCRDNSRTPMQWSSEENAGFTTGTPWFGINPNYKEINVQKQQEEPNSILNFYKKMIALKKAHAVFNYGTYDL
LLEDDPQIYAYTRTLQDEKIIVITNLSSKEAIYHKNSYTLESNRLLLSNYEISEDEGNKKIILNPYEARIYRIS

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=587, Percent_Identity=31.8568994889268, Blast_Score=266, Evalue=3e-71,
Organism=Escherichia coli, GI1790687, Length=552, Percent_Identity=40.3985507246377, Blast_Score=442, Evalue=1e-125,
Organism=Escherichia coli, GI1786604, Length=419, Percent_Identity=23.3890214797136, Blast_Score=92, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI32565753, Length=213, Percent_Identity=31.924882629108, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25147709, Length=592, Percent_Identity=23.3108108108108, Blast_Score=116, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6322245, Length=586, Percent_Identity=39.2491467576792, Blast_Score=395, Evalue=1e-111,
Organism=Saccharomyces cerevisiae, GI6321726, Length=586, Percent_Identity=40.7849829351536, Blast_Score=393, Evalue=1e-110,
Organism=Saccharomyces cerevisiae, GI6324416, Length=583, Percent_Identity=41.6809605488851, Blast_Score=391, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6322241, Length=586, Percent_Identity=40.9556313993174, Blast_Score=390, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6322021, Length=586, Percent_Identity=40.9556313993174, Blast_Score=390, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6319776, Length=590, Percent_Identity=39.8305084745763, Blast_Score=373, Evalue=1e-104,
Organism=Saccharomyces cerevisiae, GI6321731, Length=592, Percent_Identity=39.695945945946, Blast_Score=372, Evalue=1e-104,
Organism=Drosophila melanogaster, GI24583749, Length=549, Percent_Identity=34.608378870674, Blast_Score=306, Evalue=4e-83,
Organism=Drosophila melanogaster, GI24583745, Length=583, Percent_Identity=33.6192109777015, Blast_Score=305, Evalue=4e-83,
Organism=Drosophila melanogaster, GI24583747, Length=549, Percent_Identity=34.608378870674, Blast_Score=305, Evalue=4e-83,
Organism=Drosophila melanogaster, GI221330053, Length=588, Percent_Identity=32.4829931972789, Blast_Score=290, Evalue=2e-78,
Organism=Drosophila melanogaster, GI24586599, Length=585, Percent_Identity=31.6239316239316, Blast_Score=276, Evalue=3e-74,
Organism=Drosophila melanogaster, GI24586593, Length=538, Percent_Identity=33.271375464684, Blast_Score=271, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24586587, Length=584, Percent_Identity=32.0205479452055, Blast_Score=266, Evalue=4e-71,
Organism=Drosophila melanogaster, GI24586597, Length=566, Percent_Identity=31.6254416961131, Blast_Score=264, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24586589, Length=485, Percent_Identity=34.4329896907216, Blast_Score=257, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24586591, Length=491, Percent_Identity=33.4012219959267, Blast_Score=257, Evalue=2e-68,
Organism=Drosophila melanogaster, GI45549022, Length=582, Percent_Identity=31.2714776632302, Blast_Score=248, Evalue=1e-65,
Organism=Drosophila melanogaster, GI281360393, Length=484, Percent_Identity=30.5785123966942, Blast_Score=197, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.10 [H]

Molecular weight: Translated: 64940; Mature: 64940

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIWWKEAVAYQIYPRSFMDSNGDGIGDLQGIIAKLDYLKDLGIDVIWICPMYKSPNDD
CCCCCHHHCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
NGYDISDYREIMDEFGTMADFDALLEEVHKRGMKLIIDLVINHTSDEHPWFIESRSSKDN
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCEEEECCCCCCC
PKRDWYIWRDGKDGKEPNNWESIFNGSAWEYDETTDQYYLHIFSRKQPDLNWENKEVREA
CCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHH
LYETVNWWLDKGIDGFRVDAISHIKKEEGLKDMPNPKGLPYVSSFDKHMNVNGIQPLLEE
HHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHH
LKENTFAKYDIMTVGEANGVKIEDADLWVGEENGKFNMVFQFEHLSLWDAEKKKELDVVE
HHHCCCEEEEEEEECCCCCCEEECCEEEEECCCCCEEEEEEEECCEECCCHHHCCCCHHH
LKKVLTKWQKGLENKGWNALYIENHDKPRIVSTWGDDQQYWRESATALGAMYFFMHGTPF
HHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCE
IYQGQEIGMTNVQFPNIDDYDDVAIKNLYREKIAQGVSHQEMMEIIWASCRDNSRTPMQW
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
SSEENAGFTTGTPWFGINPNYKEINVQKQQEEPNSILNFYKKMIALKKAHAVFNYGTYDL
CCCCCCCCCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEE
LLEDDPQIYAYTRTLQDEKIIVITNLSSKEAIYHKNSYTLESNRLLLSNYEISEDEGNKK
EECCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCEEEECCEEEEEECEECCCCCCCE
IILNPYEARIYRIS
EEECCCCCEEEEEC
>Mature Secondary Structure
MNKIWWKEAVAYQIYPRSFMDSNGDGIGDLQGIIAKLDYLKDLGIDVIWICPMYKSPNDD
CCCCCHHHCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
NGYDISDYREIMDEFGTMADFDALLEEVHKRGMKLIIDLVINHTSDEHPWFIESRSSKDN
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCEEEECCCCCCC
PKRDWYIWRDGKDGKEPNNWESIFNGSAWEYDETTDQYYLHIFSRKQPDLNWENKEVREA
CCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHH
LYETVNWWLDKGIDGFRVDAISHIKKEEGLKDMPNPKGLPYVSSFDKHMNVNGIQPLLEE
HHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHH
LKENTFAKYDIMTVGEANGVKIEDADLWVGEENGKFNMVFQFEHLSLWDAEKKKELDVVE
HHHCCCEEEEEEEECCCCCCEEECCEEEEECCCCCEEEEEEEECCEECCCHHHCCCCHHH
LKKVLTKWQKGLENKGWNALYIENHDKPRIVSTWGDDQQYWRESATALGAMYFFMHGTPF
HHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCE
IYQGQEIGMTNVQFPNIDDYDDVAIKNLYREKIAQGVSHQEMMEIIWASCRDNSRTPMQW
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
SSEENAGFTTGTPWFGINPNYKEINVQKQQEEPNSILNFYKKMIALKKAHAVFNYGTYDL
CCCCCCCCCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEE
LLEDDPQIYAYTRTLQDEKIIVITNLSSKEAIYHKNSYTLESNRLLLSNYEISEDEGNKK
EECCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCEEEECCEEEEEECEECCCCCCCE
IILNPYEARIYRIS
EEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]