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The map label for this gene is yabM [H]

Identifier: 152973903

GI number: 152973903

Start: 59346

End: 60935

Strand: Direct

Name: yabM [H]

Synonym: Bcer98_0050

Alternate gene names: 152973903

Gene position: 59346-60935 (Clockwise)

Preceding gene: 152973902

Following gene: 152973904

Centisome position: 1.45

GC content: 35.66

Gene sequence:

>1590_bases
ATGGAAGCGAAGAAGTATCAAGCCTTTTGGCGCGGGGCAATTATATTGACAGTTGCCAGTTTTGTTACAAAAGTGTTAAG
CGCCTTTTACCGTATTCCATATCAAAATATAGCGGGGGATATCGGGTTTTATATTTATCAGCAGATTTACCCCTTTTATG
GATTTTGCCTAATCCTAGCTACGTATGGTTTTCCAATCATTATTTCTAAGATGATAGCGGAACGTTTGGAACAAGGTAGG
CGAAAGGAAGCAGAAGAAATCATTTGTGTTTCTTTTTGGTTCTTATTAGGAATTGGTAGCCTTGGCTTTTTCACTTTATT
TTTTGGTGCTCATACTATTGCGTTAGTGATGGGAGATATACAACTATATAAATTGCTGAGAGTTATTTCGTTTTCGTTTT
TATTGATGCCTTTTTTATCTGTAGCAAGAGGATACTTTCAAGGATTTAATGAGATGATGCCGACAGCTGTTTCGCAGGTA
ATGGAACAAAGTGTTCGTGTATCTATTATTGTATTGTTATCATTATTTCTTATAGCTCATGGATTTGATTTATATACAGT
TGGGGCTGGAGCAATGTTTGGATCAGTTGCTGGTGGGCTGATTGGTATGATTATACTGCTTCTTTATATGCGCCAAGATT
TCCAATCAATTTTCTTGCAAAGATGGAAAAGGATTCGAAATAAAAAAGCCATAATTCGTATGCTCTTTTGGCAAGGAATT
GGTATTTGTGTAAGTAATTTAGTTTTAATTTTTATTCAAATGGCAGATTCCCTCTCTTTTTATACTTTGCTTATTCATGC
TGGAGAACCAGCAGAAATCGCTAAAATGTTAAAAGGGGTTTATGATAGAAGTATTCCGTTAATGCAGCTTGGGACAGTTG
TAACGACATCGTTCTCGCTTTCGCTTATTCCGCTTATTACAGCGGCAAGAACAAGAGGAGATTACGTATTTATTAGAGAA
AAGGTAAAGTTGGCGATAAAAATAACGATTGTCATTGGACTTGCAGCAGCAGTTGGACTAGCTTGCATTATAAAGCCAAC
CAATATGATGTTATTTGAGAATAGTAATGGGTCAGGTGTATTAGCGATTTTAGCTATATCCATTTTATTTAGTTCATTAT
CTATTACAACTGCGTCTATTTTACAAGGATTAGGGCAAACGTTAAAGCCAGCGCTTTTTGTTGTACTAGGAAGTTGTTTA
AAGGTAGTACTTAATTATATATTGATGCCATATATAGGAATAGCAGGGGCTGCGATTGCAACTGTACTAGCACTTCTTAG
TATCGCATTGTTAAACGGTGGTTTACTTGTTCGAATTGTAGACGAAGCACTTATTGAAAAGCGGCAATTGACGAAAGTAA
TGATTAGCGGTATAGGTATGGCTGTTACATTGATGGTTTTTATAAATATATTTGAAAGCTTAGGTCATATGAGCCGAATT
TTTGCATCAGTTGAGGCCTTATTAGGAGTAGGAGTTGGCGTTCTTATATACGGATTTTTCATTTTGAAAATGTCTGTTTT
TACAAAAGAAGAACTGGGAACTTTTATGAAGCAAGATAAAATAAAAGATTCCTTGAAGAAGAGTGGATAG

Upstream 100 bases:

>100_bases
TATTTTTTATCCGCTCAGGATGAGATTGTTTCAAATAGAATTCTGCTTTTTTCTTTGTGATATAATACGGAAGATGAGAA
TAGAAAAGGAGTTTTCTCGT

Downstream 100 bases:

>100_bases
AGGTGACTTCTGTGAGTGGAGTAATTACAGTGTTAGGATTAGGAGCTGGTGAGTTAGACCAGCTAACAATGGGTGTATAT
AAAAAGATAAAAGAAGCATC

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MEAKKYQAFWRGAIILTVASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMIAERLEQGR
RKEAEEIICVSFWFLLGIGSLGFFTLFFGAHTIALVMGDIQLYKLLRVISFSFLLMPFLSVARGYFQGFNEMMPTAVSQV
MEQSVRVSIIVLLSLFLIAHGFDLYTVGAGAMFGSVAGGLIGMIILLLYMRQDFQSIFLQRWKRIRNKKAIIRMLFWQGI
GICVSNLVLIFIQMADSLSFYTLLIHAGEPAEIAKMLKGVYDRSIPLMQLGTVVTTSFSLSLIPLITAARTRGDYVFIRE
KVKLAIKITIVIGLAAAVGLACIIKPTNMMLFENSNGSGVLAILAISILFSSLSITTASILQGLGQTLKPALFVVLGSCL
KVVLNYILMPYIGIAGAAIATVLALLSIALLNGGLLVRIVDEALIEKRQLTKVMISGIGMAVTLMVFINIFESLGHMSRI
FASVEALLGVGVGVLIYGFFILKMSVFTKEELGTFMKQDKIKDSLKKSG

Sequences:

>Translated_529_residues
MEAKKYQAFWRGAIILTVASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMIAERLEQGR
RKEAEEIICVSFWFLLGIGSLGFFTLFFGAHTIALVMGDIQLYKLLRVISFSFLLMPFLSVARGYFQGFNEMMPTAVSQV
MEQSVRVSIIVLLSLFLIAHGFDLYTVGAGAMFGSVAGGLIGMIILLLYMRQDFQSIFLQRWKRIRNKKAIIRMLFWQGI
GICVSNLVLIFIQMADSLSFYTLLIHAGEPAEIAKMLKGVYDRSIPLMQLGTVVTTSFSLSLIPLITAARTRGDYVFIRE
KVKLAIKITIVIGLAAAVGLACIIKPTNMMLFENSNGSGVLAILAISILFSSLSITTASILQGLGQTLKPALFVVLGSCL
KVVLNYILMPYIGIAGAAIATVLALLSIALLNGGLLVRIVDEALIEKRQLTKVMISGIGMAVTLMVFINIFESLGHMSRI
FASVEALLGVGVGVLIYGFFILKMSVFTKEELGTFMKQDKIKDSLKKSG
>Mature_529_residues
MEAKKYQAFWRGAIILTVASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMIAERLEQGR
RKEAEEIICVSFWFLLGIGSLGFFTLFFGAHTIALVMGDIQLYKLLRVISFSFLLMPFLSVARGYFQGFNEMMPTAVSQV
MEQSVRVSIIVLLSLFLIAHGFDLYTVGAGAMFGSVAGGLIGMIILLLYMRQDFQSIFLQRWKRIRNKKAIIRMLFWQGI
GICVSNLVLIFIQMADSLSFYTLLIHAGEPAEIAKMLKGVYDRSIPLMQLGTVVTTSFSLSLIPLITAARTRGDYVFIRE
KVKLAIKITIVIGLAAAVGLACIIKPTNMMLFENSNGSGVLAILAISILFSSLSITTASILQGLGQTLKPALFVVLGSCL
KVVLNYILMPYIGIAGAAIATVLALLSIALLNGGLLVRIVDEALIEKRQLTKVMISGIGMAVTLMVFINIFESLGHMSRI
FASVEALLGVGVGVLIYGFFILKMSVFTKEELGTFMKQDKIKDSLKKSG

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 58321; Mature: 58321

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]