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The map label for this gene is spoVT [H]

Identifier: 152973902

GI number: 152973902

Start: 58569

End: 59105

Strand: Direct

Name: spoVT [H]

Synonym: Bcer98_0049

Alternate gene names: 152973902

Gene position: 58569-59105 (Clockwise)

Preceding gene: 152973901

Following gene: 152973903

Centisome position: 1.43

GC content: 35.75

Gene sequence:

>537_bases
ATGAAAGCAACTGGAATCGTACGTCGAATTGATGATTTAGGTAGGGTGGTAATTCCAAAAGAAATCCGTAGAACTTTACG
TATTCGCGAGGGAGATCCACTAGAAATATTTGTTGATCGCGATGGAGAAGTGATTTTAAAAAAATATTCTCCAATTAGTG
AATTAGGTGATTTTGCAAAAGAATATGCAGATGCTTTATATGATAGCTTAGGACATAATGTACTCGTATGTGATCGAGAT
TCCGTTATTGCTGTAGCGGGGGTATCTAAAAAAGAATACTTAAATAAAAGCATCGGTGATTTAATTGAAAGGATAATGGA
AGAAAGAAAGTCTGTTATTATGACAGATGAAAGTGAAATTTCAATTATTGAAGGGGTAACTGAAAAGGCTCATTCTTATA
CGATTGGTCCTATTGTCGCCAATGGAGATCCAATTGGAGCTGTTATCATTTTCTCGAAGGATACAGTTATAACTGAGGTA
GAGCATAAAGCTGTAGATACTGCTGCAGGCTTTTTAGCTAAGCAAATGGAGCAATAA

Upstream 100 bases:

>100_bases
GAACTAATGTGTAAAATACTATGTTTAACAGTTGGTGATTTTTACATGAACAGGTAATTTCACCACTTTCATCATCAGTA
GAAAGAGAGGCAGCATTAGA

Downstream 100 bases:

>100_bases
GCAATATAACCATTTATAAATAATAACCTTTCCTAATTAGAATTTTTCCTTATTAGAAAATATAACTGTTGTGTGAAGAT
AAATATTTATAAAAAGGGTA

Product: AbrB family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHNVLVCDRD
SVIAVAGVSKKEYLNKSIGDLIERIMEERKSVIMTDESEISIIEGVTEKAHSYTIGPIVANGDPIGAVIIFSKDTVITEV
EHKAVDTAAGFLAKQMEQ

Sequences:

>Translated_178_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHNVLVCDRD
SVIAVAGVSKKEYLNKSIGDLIERIMEERKSVIMTDESEISIIEGVTEKAHSYTIGPIVANGDPIGAVIIFSKDTVITEV
EHKAVDTAAGFLAKQMEQ
>Mature_178_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHNVLVCDRD
SVIAVAGVSKKEYLNKSIGDLIERIMEERKSVIMTDESEISIIEGVTEKAHSYTIGPIVANGDPIGAVIIFSKDTVITEV
EHKAVDTAAGFLAKQMEQ

Specific function: Positive and negative transcriptional regulator of sigma G-dependent genes. May provide a mechanism of feedback control that is important for forespore development [H]

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis AbrB and Abh [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014213
- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 19704; Mature: 19704

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAK
CCCHHHHHHHHHCCCEECCHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH
EYADALYDSLGHNVLVCDRDSVIAVAGVSKKEYLNKSIGDLIERIMEERKSVIMTDESEI
HHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCH
SIIEGVTEKAHSYTIGPIVANGDPIGAVIIFSKDTVITEVEHKAVDTAAGFLAKQMEQ
HHHHHHHHHHCCEEECEEEECCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAK
CCCHHHHHHHHHCCCEECCHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH
EYADALYDSLGHNVLVCDRDSVIAVAGVSKKEYLNKSIGDLIERIMEERKSVIMTDESEI
HHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCH
SIIEGVTEKAHSYTIGPIVANGDPIGAVIIFSKDTVITEVEHKAVDTAAGFLAKQMEQ
HHHHHHHHHHCCEEECEEEECCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 8755877 [H]