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The map label for this gene is yliD [C]

Identifier: 152970570

GI number: 152970570

Start: 2214325

End: 2215272

Strand: Direct

Name: yliD [C]

Synonym: KPN_02021

Alternate gene names: 152970570

Gene position: 2214325-2215272 (Clockwise)

Preceding gene: 152970569

Following gene: 152970571

Centisome position: 41.66

GC content: 63.71

Gene sequence:

>948_bases
ATGATCCTGTCTTACTTAGTTTCCCGTCGCCGCCAGCGGCAGGCGGCTATCCCGGCGCTGGCGCACAATACCCCCTCTCC
CTGGCGCCAGGGGTGGCGACAGCTGCGCCGTAACCGGCTGGCCATGTTCTGCCTGCTCCTGCTGGCGGTGATGGCGGTGT
GGTGCGTGCTGGGGCCCGTCTGGTCGCCGTGGAGTGATGATGCCACCGACGCCCTGAGCATCAACCAGCCGCCCGGGGCG
GAACACTGGCTGGGGACCGATTTCCTCGGTCGCGATGTCTACACCCGCCTGCTGCTGGCCGGGCGCATCTCGCTGATTAT
CGGCCTGCTGACCATGGTGATGTCGGTGTGCCTCGGCTACCTGCTCGGCGCCCTCTCGGGTTACGTCGGCGGGTTAACCG
ACAAACTGATCATGCGCGTGGCCGACCTGGTGATGACTATCCCTGGGTTACCGCTATTGATCGTCGCCGGGGCGATGCTT
TCTGAGCTCGATTTTTCGCCGGACTCGCGCATTTATATGGTGGTGGTGATGCTCAGCCTGCTGGAGTGGCCCCGACTGGC
GCGGCTGGTGCGCGGGCAATGTCTATCCCTGCGCGAACGCGATTTTATGCTGGCCACCCAGGTGCTGGGTCTGTCGGCGC
GTCGCCGGCTGTTTGGCCACCTGCTGCCGAATACCATTCCGATTCTGGTGGTGATGGCGACCATGGCCGTCGCCAACGCC
ATTCTCAGTGAATCCGCGCTGAGCTATCTCGGCCTCGGCGTGGTGCCGCCGACGCCGTCGTGGGGCAATATGATGGATGC
CGCTAACAGCCTGATCGATTTCCAGCGCCGCCCCTGGCTGTGGATGCCGCCGGGCATCGCCATCTTTATCACCGTGATCG
CCATCAATGTGCTGGGCGATGGCCTGCGCGACGCCATGGATCCCAATATGAAACCGAGGCTGAAATGA

Upstream 100 bases:

>100_bases
TGGGGTTTACCCTGTTTCTGGCGGTGCTGACGATAGTCGGGAATCTGCTCGCCGACGTGCTGTACGCCTGGGCCGATCCG
CGTATTCGGGTGAGGTCATA

Downstream 100 bases:

>100_bases
CCACGCCGTTAGTCTCCTTTAATCATCTTTCCGTCTCTTTCGCCGGCGAACGCTCTCGCGTGCGCGCGGTGCAGGAGGTC
TCTTTCACCATTCAGGCCGG

Product: oligopeptide ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MILSYLVSRRRQRQAAIPALAHNTPSPWRQGWRQLRRNRLAMFCLLLLAVMAVWCVLGPVWSPWSDDATDALSINQPPGA
EHWLGTDFLGRDVYTRLLLAGRISLIIGLLTMVMSVCLGYLLGALSGYVGGLTDKLIMRVADLVMTIPGLPLLIVAGAML
SELDFSPDSRIYMVVVMLSLLEWPRLARLVRGQCLSLRERDFMLATQVLGLSARRRLFGHLLPNTIPILVVMATMAVANA
ILSESALSYLGLGVVPPTPSWGNMMDAANSLIDFQRRPWLWMPPGIAIFITVIAINVLGDGLRDAMDPNMKPRLK

Sequences:

>Translated_315_residues
MILSYLVSRRRQRQAAIPALAHNTPSPWRQGWRQLRRNRLAMFCLLLLAVMAVWCVLGPVWSPWSDDATDALSINQPPGA
EHWLGTDFLGRDVYTRLLLAGRISLIIGLLTMVMSVCLGYLLGALSGYVGGLTDKLIMRVADLVMTIPGLPLLIVAGAML
SELDFSPDSRIYMVVVMLSLLEWPRLARLVRGQCLSLRERDFMLATQVLGLSARRRLFGHLLPNTIPILVVMATMAVANA
ILSESALSYLGLGVVPPTPSWGNMMDAANSLIDFQRRPWLWMPPGIAIFITVIAINVLGDGLRDAMDPNMKPRLK
>Mature_315_residues
MILSYLVSRRRQRQAAIPALAHNTPSPWRQGWRQLRRNRLAMFCLLLLAVMAVWCVLGPVWSPWSDDATDALSINQPPGA
EHWLGTDFLGRDVYTRLLLAGRISLIIGLLTMVMSVCLGYLLGALSGYVGGLTDKLIMRVADLVMTIPGLPLLIVAGAML
SELDFSPDSRIYMVVVMLSLLEWPRLARLVRGQCLSLRERDFMLATQVLGLSARRRLFGHLLPNTIPILVVMATMAVANA
ILSESALSYLGLGVVPPTPSWGNMMDAANSLIDFQRRPWLWMPPGIAIFITVIAINVLGDGLRDAMDPNMKPRLK

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=305, Percent_Identity=37.3770491803279, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1787498, Length=287, Percent_Identity=36.2369337979094, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1789889, Length=250, Percent_Identity=38, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787760, Length=266, Percent_Identity=33.8345864661654, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1789964, Length=300, Percent_Identity=36.3333333333333, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1787549, Length=290, Percent_Identity=33.448275862069, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1788505, Length=258, Percent_Identity=30.2325581395349, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34881; Mature: 34881

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSYLVSRRRQRQAAIPALAHNTPSPWRQGWRQLRRNRLAMFCLLLLAVMAVWCVLGPV
CHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WSPWSDDATDALSINQPPGAEHWLGTDFLGRDVYTRLLLAGRISLIIGLLTMVMSVCLGY
CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGALSGYVGGLTDKLIMRVADLVMTIPGLPLLIVAGAMLSELDFSPDSRIYMVVVMLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LEWPRLARLVRGQCLSLRERDFMLATQVLGLSARRRLFGHLLPNTIPILVVMATMAVANA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ILSESALSYLGLGVVPPTPSWGNMMDAANSLIDFQRRPWLWMPPGIAIFITVIAINVLGD
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHH
GLRDAMDPNMKPRLK
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MILSYLVSRRRQRQAAIPALAHNTPSPWRQGWRQLRRNRLAMFCLLLLAVMAVWCVLGPV
CHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WSPWSDDATDALSINQPPGAEHWLGTDFLGRDVYTRLLLAGRISLIIGLLTMVMSVCLGY
CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGALSGYVGGLTDKLIMRVADLVMTIPGLPLLIVAGAMLSELDFSPDSRIYMVVVMLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LEWPRLARLVRGQCLSLRERDFMLATQVLGLSARRRLFGHLLPNTIPILVVMATMAVANA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ILSESALSYLGLGVVPPTPSWGNMMDAANSLIDFQRRPWLWMPPGIAIFITVIAINVLGD
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHH
GLRDAMDPNMKPRLK
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA