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The map label for this gene is slyB [H]

Identifier: 152970531

GI number: 152970531

Start: 2175193

End: 2175633

Strand: Direct

Name: slyB [H]

Synonym: KPN_01979

Alternate gene names: 152970531

Gene position: 2175193-2175633 (Clockwise)

Preceding gene: 152970525

Following gene: 152970532

Centisome position: 40.92

GC content: 61.22

Gene sequence:

>441_bases
ATGATTGGTTTTACGCTCGCAGGCTGCGTGAGCAGCAGCGGCCTGTCCGGCGACGTTTATTCCGCATCTGAAGCCAAACA
GGTGCAGAGCGTGACTTACGGTACTATCGTGCATACGCGCGCCGTACAGATCCAGAGCGGCGACGATAGCAATGCCATCG
GGGCCATTGGCGGTGCGGTACTGGGCGGGTTCCTTGGAAACACCATCGGCGGCGGTACCGGACGCTCTCTGGCTACGGCG
GCAGGTGCGGTCGCGGGCGGCGTAGCCGGTCAGGGCGTTCAGGGCGCGATGAATAAAACGCAGGGCGTTGAACTGGAAAT
CCGTAAGGACGATGGCAATACCATTATGGTAGTGCAGAAACAGGGCAGCACTCCGTTCTCCGTTGGTCAGCGCGTGGCCA
TTGCCGGCAGCGGCAGCCAGGTCACCGTCTCTCCGCGATAA

Upstream 100 bases:

>100_bases
CGACGACTAAATGCCATATAATTAACCGTATGGACGTTCAATTGAACACCTTCGGTGAACAGGAGATTCATAAATGATTT
TACGTGTTTTGGCTGTATCG

Downstream 100 bases:

>100_bases
TTTCCCTTACGATGCGGCCGGTTGCGCCGCATCGTATTTTTCAGCCACGTTTATTTCGCCGTAATAAATTCGTAGTAACC
ATCAGACATCTTTATTTTAA

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MIGFTLAGCVSSSGLSGDVYSASEAKQVQSVTYGTIVHTRAVQIQSGDDSNAIGAIGGAVLGGFLGNTIGGGTGRSLATA
AGAVAGGVAGQGVQGAMNKTQGVELEIRKDDGNTIMVVQKQGSTPFSVGQRVAIAGSGSQVTVSPR

Sequences:

>Translated_146_residues
MIGFTLAGCVSSSGLSGDVYSASEAKQVQSVTYGTIVHTRAVQIQSGDDSNAIGAIGGAVLGGFLGNTIGGGTGRSLATA
AGAVAGGVAGQGVQGAMNKTQGVELEIRKDDGNTIMVVQKQGSTPFSVGQRVAIAGSGSQVTVSPR
>Mature_146_residues
MIGFTLAGCVSSSGLSGDVYSASEAKQVQSVTYGTIVHTRAVQIQSGDDSNAIGAIGGAVLGGFLGNTIGGGTGRSLATA
AGAVAGGVAGQGVQGAMNKTQGVELEIRKDDGNTIMVVQKQGSTPFSVGQRVAIAGSGSQVTVSPR

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=146, Percent_Identity=82.8767123287671, Blast_Score=208, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 14272; Mature: 14272

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFTLAGCVSSSGLSGDVYSASEAKQVQSVTYGTIVHTRAVQIQSGDDSNAIGAIGGAV
CCCEEEECHHCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCHHHHHHH
LGGFLGNTIGGGTGRSLATAAGAVAGGVAGQGVQGAMNKTQGVELEIRKDDGNTIMVVQK
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC
QGSTPFSVGQRVAIAGSGSQVTVSPR
CCCCCCCCCCEEEEECCCCEEEEECC
>Mature Secondary Structure
MIGFTLAGCVSSSGLSGDVYSASEAKQVQSVTYGTIVHTRAVQIQSGDDSNAIGAIGGAV
CCCEEEECHHCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCHHHHHHH
LGGFLGNTIGGGTGRSLATAAGAVAGGVAGQGVQGAMNKTQGVELEIRKDDGNTIMVVQK
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC
QGSTPFSVGQRVAIAGSGSQVTVSPR
CCCCCCCCCCEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]