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The map label for this gene is yeaM [H]

Identifier: 152970145

GI number: 152970145

Start: 1769597

End: 1770439

Strand: Direct

Name: yeaM [H]

Synonym: KPN_01593

Alternate gene names: 152970145

Gene position: 1769597-1770439 (Clockwise)

Preceding gene: 152970143

Following gene: 152970148

Centisome position: 33.29

GC content: 53.26

Gene sequence:

>843_bases
ATGAATACTTTACAATCGACTAACTGGCTTCAGTACGGTATAAAAGACATTAAACACCTCAAACACGCCAATATGCACGA
TCCATTGATTCCATTCGAACCGGTGTTTTCACCCCAGGGACCCACTTTACTCGTCGCGGTACGTCAGTCTGAGGTAATAC
GGGAGACTCCACGCCACCATCACAGCTGTGGGCAGTTAATCGGTGCCATACGTGGGCTACTTACGGTCGATGGCGGTGAT
TGTCGCTGGGTGGTACCGGCAACACATGCCGTCTGGATACCGCCAGGTGTTCCGCACGGCCTGCGCTCGCACGGTCCATA
TTCAGGATGGAGTGTTTATGTTTCTGCCAAAGCCTGTGGCGAGCTACCTGATAAGCCATCTGTTCTCTCAATGACAAATC
TGCTGCGTGAAGCGATAACGCGAGCGGCTGCATGGCAAGGTGTAGAGCTTAATGCGTCCCAAAAACGTTTAGCTGGCGTT
ATTCTTGATGAAATTGGTTCCCTTCCCAGGGTTAATCTTGGGCTTCCAATGCCGCAAGATAGCCGATTGCTCAGAATCGC
GCAGGCGCTGTCAGCAAACCCGGACGACGGGCGCAGGTTGGAAGAATGGGCAGCCTGGGCCGGCATGTCATCACGCACGC
TCACGCGACGATTCCGAGCCGAAACGGGTTTTAGCTTCAATGAATGGCGACAGCGGATACGCTTACTCAGGGCTCTTGAG
CTACTGGCTGCCGGCAAGCCAGTGACGGCGATAGCGCTGGATCTGGGATATGACAATGTGAGTGCCTTCATAGCCTTGTT
CCGTCGGATGTTCGGCACTACTCCAGGGCGGTATAAAATTTAA

Upstream 100 bases:

>100_bases
GACTGAGTATCCGATCCAGTGGTATCTGTTGGTGGTTGATAATGTCATCCAATACCCTAGTAATAGTAATCATTTTGATG
GTTAGTCCTCTGTGAAAGTG

Downstream 100 bases:

>100_bases
TTATCTCTTCGCTGAATATGATGCGTTATCCGCCGCTTTGATTACGTTTGTCATGGGCTGAGAGGGGCAAGTAATTCGGG
CCCCTGATTTTTCACATTGC

Product: putative ARAC-type regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNTLQSTNWLQYGIKDIKHLKHANMHDPLIPFEPVFSPQGPTLLVAVRQSEVIRETPRHHHSCGQLIGAIRGLLTVDGGD
CRWVVPATHAVWIPPGVPHGLRSHGPYSGWSVYVSAKACGELPDKPSVLSMTNLLREAITRAAAWQGVELNASQKRLAGV
ILDEIGSLPRVNLGLPMPQDSRLLRIAQALSANPDDGRRLEEWAAWAGMSSRTLTRRFRAETGFSFNEWRQRIRLLRALE
LLAAGKPVTAIALDLGYDNVSAFIALFRRMFGTTPGRYKI

Sequences:

>Translated_280_residues
MNTLQSTNWLQYGIKDIKHLKHANMHDPLIPFEPVFSPQGPTLLVAVRQSEVIRETPRHHHSCGQLIGAIRGLLTVDGGD
CRWVVPATHAVWIPPGVPHGLRSHGPYSGWSVYVSAKACGELPDKPSVLSMTNLLREAITRAAAWQGVELNASQKRLAGV
ILDEIGSLPRVNLGLPMPQDSRLLRIAQALSANPDDGRRLEEWAAWAGMSSRTLTRRFRAETGFSFNEWRQRIRLLRALE
LLAAGKPVTAIALDLGYDNVSAFIALFRRMFGTTPGRYKI
>Mature_280_residues
MNTLQSTNWLQYGIKDIKHLKHANMHDPLIPFEPVFSPQGPTLLVAVRQSEVIRETPRHHHSCGQLIGAIRGLLTVDGGD
CRWVVPATHAVWIPPGVPHGLRSHGPYSGWSVYVSAKACGELPDKPSVLSMTNLLREAITRAAAWQGVELNASQKRLAGV
ILDEIGSLPRVNLGLPMPQDSRLLRIAQALSANPDDGRRLEEWAAWAGMSSRTLTRRFRAETGFSFNEWRQRIRLLRALE
LLAAGKPVTAIALDLGYDNVSAFIALFRRMFGTTPGRYKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788091, Length=224, Percent_Identity=34.375, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 31062; Mature: 31062

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLQSTNWLQYGIKDIKHLKHANMHDPLIPFEPVFSPQGPTLLVAVRQSEVIRETPRHH
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHCCHHH
HSCGQLIGAIRGLLTVDGGDCRWVVPATHAVWIPPGVPHGLRSHGPYSGWSVYVSAKACG
HHHHHHHHHHHHHEEECCCCEEEEEECCEEEECCCCCCCCHHCCCCCCCEEEEEEHHHHC
ELPDKPSVLSMTNLLREAITRAAAWQGVELNASQKRLAGVILDEIGSLPRVNLGLPMPQD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC
SRLLRIAQALSANPDDGRRLEEWAAWAGMSSRTLTRRFRAETGFSFNEWRQRIRLLRALE
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLAAGKPVTAIALDLGYDNVSAFIALFRRMFGTTPGRYKI
HHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNTLQSTNWLQYGIKDIKHLKHANMHDPLIPFEPVFSPQGPTLLVAVRQSEVIRETPRHH
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHCCHHH
HSCGQLIGAIRGLLTVDGGDCRWVVPATHAVWIPPGVPHGLRSHGPYSGWSVYVSAKACG
HHHHHHHHHHHHHEEECCCCEEEEEECCEEEECCCCCCCCHHCCCCCCCEEEEEEHHHHC
ELPDKPSVLSMTNLLREAITRAAAWQGVELNASQKRLAGVILDEIGSLPRVNLGLPMPQD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC
SRLLRIAQALSANPDDGRRLEEWAAWAGMSSRTLTRRFRAETGFSFNEWRQRIRLLRALE
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLAAGKPVTAIALDLGYDNVSAFIALFRRMFGTTPGRYKI
HHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]