Click here to switch to the map view.

The map label for this gene is abrB [H]

Identifier: 152969860

GI number: 152969860

Start: 1466238

End: 1467290

Strand: Direct

Name: abrB [H]

Synonym: KPN_01306

Alternate gene names: 152969860

Gene position: 1466238-1467290 (Clockwise)

Preceding gene: 152969859

Following gene: 152969861

Centisome position: 27.59

GC content: 63.63

Gene sequence:

>1053_bases
TTGGCGTCGCGTCGCGCGATCGGGCACTGGCTGATATTGCTGCTGCTCTCTGTTCTCTTTTCCTCGCTGCTGTTACGAAT
ACACCTGCCGGCAGCGCTGCTGCTGGGGCCGCTGATCGCCGGTCTCATTTTGAGCCTGCGCGGGGTGAAGCTGAGCATCC
CTCGCCCCTGTTATCTGGCGGCGCAGGCCATTGTCGGCTGCATGATCGCCCGGGCGATTAATCCCTCTGTTTTTGGCGTG
CTGTTCAACAACTGGGCGCTGGTGCTGGCGATCCTGTTGACCACCCTGGCGATAAGCGGCCTTACCGGCTGGCTGCTGGT
CCGCTACAGCGCGCTGCCGGGCGCCACTGGCGCCTGGGGAAGCTCTCCCGGCGGCGCGTCGGCAATGGTGGTGATGGCCC
AGGAGTACGGGGCCGATGTGCGGCTGGTTGCGCTGATGCAGTATCTGCGGGTGCTGTTTGTCGTCGGCGCGGCGGCGCTG
GTGGTGCGCTATGCCCTGGGCAATGAAGCACAGGAAATGACTCAGGATATTGTCTGGTTTCCATCGTTGACCCTGAATTT
CCCTTTCACGCTGCTGCTGACGGCGGTGGCCTGTTGGCTGGGCATGCGGCTGCGCATCCCCTCCGGGGCCATGCTGCTGC
CGATGCTGCTTGGCGCGCTGGCCCAGGGCGGCGGCTGGCTGATGCTGGAGCTGCCGGAGTGGCTGCTGGCGATGGCCTAT
GCGGTGCTGGGCTGGACGGTGGGGCTCCAGTTTAATAAAGCCATTTTTCTGCTGGCGCTCAAGACGCTGCCGCAGATTAT
CGCCTCCATCCTCGGACTGATCCTGATGTGCGCCCTGATGGCCCTTGCCCTGACCCACATTCTGCAGATGGACTTTATGA
CCGCCTATCTGGCCACCAGCCCCGGCGGGCTGGACACGGTGGCGATTATCGCCGCCGGCACCCGGGCGGATATGTCGTTT
ATTATGGCGCTACAGACGCTGCGGCTGTTTACCATTTTGCTGACCGGCCCGGCGATGGCGCGGGCTATCTCCCGCTATGC
GCCGCGGCAATAA

Upstream 100 bases:

>100_bases
CCCGCCAGGCCGGCGACTCACGTCGCCGGCATCCCGGCCTGCAAAGCGGGCCAAACCTGTATATACTGGTTTTTTAATCC
TTTTTCCGGGGTGGTGCATC

Downstream 100 bases:

>100_bases
AAAGCCCTCGCAGAGCGAGGGCTGGGCAGATCGAATGTCCGCGAGCGCGATGCGCCCGGGCAATCTGTTATCAGGCTTTC
AGGGCGGCCAGCGCGGCGTC

Product: putative transport protein

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MASRRAIGHWLILLLLSVLFSSLLLRIHLPAALLLGPLIAGLILSLRGVKLSIPRPCYLAAQAIVGCMIARAINPSVFGV
LFNNWALVLAILLTTLAISGLTGWLLVRYSALPGATGAWGSSPGGASAMVVMAQEYGADVRLVALMQYLRVLFVVGAAAL
VVRYALGNEAQEMTQDIVWFPSLTLNFPFTLLLTAVACWLGMRLRIPSGAMLLPMLLGALAQGGGWLMLELPEWLLAMAY
AVLGWTVGLQFNKAIFLLALKTLPQIIASILGLILMCALMALALTHILQMDFMTAYLATSPGGLDTVAIIAAGTRADMSF
IMALQTLRLFTILLTGPAMARAISRYAPRQ

Sequences:

>Translated_350_residues
MASRRAIGHWLILLLLSVLFSSLLLRIHLPAALLLGPLIAGLILSLRGVKLSIPRPCYLAAQAIVGCMIARAINPSVFGV
LFNNWALVLAILLTTLAISGLTGWLLVRYSALPGATGAWGSSPGGASAMVVMAQEYGADVRLVALMQYLRVLFVVGAAAL
VVRYALGNEAQEMTQDIVWFPSLTLNFPFTLLLTAVACWLGMRLRIPSGAMLLPMLLGALAQGGGWLMLELPEWLLAMAY
AVLGWTVGLQFNKAIFLLALKTLPQIIASILGLILMCALMALALTHILQMDFMTAYLATSPGGLDTVAIIAAGTRADMSF
IMALQTLRLFTILLTGPAMARAISRYAPRQ
>Mature_349_residues
ASRRAIGHWLILLLLSVLFSSLLLRIHLPAALLLGPLIAGLILSLRGVKLSIPRPCYLAAQAIVGCMIARAINPSVFGVL
FNNWALVLAILLTTLAISGLTGWLLVRYSALPGATGAWGSSPGGASAMVVMAQEYGADVRLVALMQYLRVLFVVGAAALV
VRYALGNEAQEMTQDIVWFPSLTLNFPFTLLLTAVACWLGMRLRIPSGAMLLPMLLGALAQGGGWLMLELPEWLLAMAYA
VLGWTVGLQFNKAIFLLALKTLPQIIASILGLILMCALMALALTHILQMDFMTAYLATSPGGLDTVAIIAAGTRADMSFI
MALQTLRLFTILLTGPAMARAISRYAPRQ

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=342, Percent_Identity=62.5730994152047, Blast_Score=395, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 37472; Mature: 37341

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRRAIGHWLILLLLSVLFSSLLLRIHLPAALLLGPLIAGLILSLRGVKLSIPRPCYLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHH
AQAIVGCMIARAINPSVFGVLFNNWALVLAILLTTLAISGLTGWLLVRYSALPGATGAWG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSPGGASAMVVMAQEYGADVRLVALMQYLRVLFVVGAAALVVRYALGNEAQEMTQDIVWF
CCCCCCHHEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
PSLTLNFPFTLLLTAVACWLGMRLRIPSGAMLLPMLLGALAQGGGWLMLELPEWLLAMAY
CCCCCCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
AVLGWTVGLQFNKAIFLLALKTLPQIIASILGLILMCALMALALTHILQMDFMTAYLATS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGLDTVAIIAAGTRADMSFIMALQTLRLFTILLTGPAMARAISRYAPRQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASRRAIGHWLILLLLSVLFSSLLLRIHLPAALLLGPLIAGLILSLRGVKLSIPRPCYLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHH
AQAIVGCMIARAINPSVFGVLFNNWALVLAILLTTLAISGLTGWLLVRYSALPGATGAWG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSPGGASAMVVMAQEYGADVRLVALMQYLRVLFVVGAAALVVRYALGNEAQEMTQDIVWF
CCCCCCHHEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
PSLTLNFPFTLLLTAVACWLGMRLRIPSGAMLLPMLLGALAQGGGWLMLELPEWLLAMAY
CCCCCCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
AVLGWTVGLQFNKAIFLLALKTLPQIIASILGLILMCALMALALTHILQMDFMTAYLATS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGLDTVAIIAAGTRADMSFIMALQTLRLFTILLTGPAMARAISRYAPRQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]