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The map label for this gene is ybgF [H]

Identifier: 152969310

GI number: 152969310

Start: 837051

End: 837845

Strand: Direct

Name: ybgF [H]

Synonym: KPN_00746

Alternate gene names: 152969310

Gene position: 837051-837845 (Clockwise)

Preceding gene: 152969309

Following gene: 152969311

Centisome position: 15.75

GC content: 54.47

Gene sequence:

>795_bases
ATGAGCAGTAACTTCAGACATCATTTATTGAGTCTGTCGTTACTGGTTGGCATAGCGGCCCCCTGGGCCGCTTTTGCTCA
GGCGCCAATCAGTAGTGTCGGCTCAGGCTCGGTCGAAGACCGCGTCACTCAACTCGAGCGTATTTCCAATGCTCACAGCC
AGCTTTTAACCCAACTCCAGCAACAACTCTCTGATAACCAGACTGACATTGATTCTCTCCGCGGGCAGATCCAGGAGAAC
CAGTACCAGCTGAATCAGATCGTTGAGCGCCAGAAACAGATTCTGCTGCAGATAGATAGTTTGAGCAGCGGTGGCGGCGC
AGCATCAGGTGCGCAGGCTCCGTCGTCTTCTGGCGATCAGAGCGCGGCTGCCACCAGCGCAGCGCCAGCGGCCACCTCAG
GCGCCCCGGCGATGACCGGCGATGCGAACACCGATTATAATGCCGCTATTGCCCTGGTGAAGGATGCCTCACGCCAGGAT
GACGCGATGGTGGCGTTTCAAAACTTCGTCAAAAAGTACCCGGATTCAACCTACCAGCCAAACGCTAACTACTGGCTCGG
GCAGTTGAACTACAATAAGGGGAGAAAAGACGACGCGGCGTTTTACTTCGCTTCGGTGGTGAAGAACTACCCGAAATCGC
CAAAAGCGCCTGACGCGATGTTTAAAGTCGGCGTGATCATGCAGGACAAAGGTGATACCGCGAAAGCGAAAGCGGTTTAC
CAGCAGGTGATCAATAAATTCCCCGGCACCGACGGTGCGAAACAAGCGCAAAAACGACTTAATGCTCTTGGTTGA

Upstream 100 bases:

>100_bases
CATCGTTTCTTACGGTAAAGAAAAACCAGCAGTACTGGGTCATGACGAAGCGGCATATGCCAAAAACCGTCGCGCCGTAC
TGGTTTACTAAGAGAATTGC

Downstream 100 bases:

>100_bases
TTACGGCATGACCAGAAATCGCGTTATTTCTGGTCTTGTCGCCTGAATCGCCAGCAGTTAAGTGATCTTTATCGAAATTT
TAGTTGCGCTGAATTCTGAA

Product: tol-pal system protein YbgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSSNFRHHLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQQQLSDNQTDIDSLRGQIQEN
QYQLNQIVERQKQILLQIDSLSSGGGAASGAQAPSSSGDQSAAATSAAPAATSGAPAMTGDANTDYNAAIALVKDASRQD
DAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGRKDDAAFYFASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVY
QQVINKFPGTDGAKQAQKRLNALG

Sequences:

>Translated_264_residues
MSSNFRHHLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQQQLSDNQTDIDSLRGQIQEN
QYQLNQIVERQKQILLQIDSLSSGGGAASGAQAPSSSGDQSAAATSAAPAATSGAPAMTGDANTDYNAAIALVKDASRQD
DAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGRKDDAAFYFASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVY
QQVINKFPGTDGAKQAQKRLNALG
>Mature_263_residues
SSNFRHHLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQQQLSDNQTDIDSLRGQIQENQ
YQLNQIVERQKQILLQIDSLSSGGGAASGAQAPSSSGDQSAAATSAAPAATSGAPAMTGDANTDYNAAIALVKDASRQDD
AMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGRKDDAAFYFASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQ
QVINKFPGTDGAKQAQKRLNALG

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=268, Percent_Identity=85.8208955223881, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28202; Mature: 28070

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNFRHHLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QQLSDNQTDIDSLRGQIQENQYQLNQIVERQKQILLQIDSLSSGGGAASGAQAPSSSGDQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SAAATSAAPAATSGAPAMTGDANTDYNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQP
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCC
NANYWLGQLNYNKGRKDDAAFYFASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVY
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEEECCCCHHHHHHHH
QQVINKFPGTDGAKQAQKRLNALG
HHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SSNFRHHLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QQLSDNQTDIDSLRGQIQENQYQLNQIVERQKQILLQIDSLSSGGGAASGAQAPSSSGDQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SAAATSAAPAATSGAPAMTGDANTDYNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQP
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCC
NANYWLGQLNYNKGRKDDAAFYFASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVY
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEEECCCCHHHHHHHH
QQVINKFPGTDGAKQAQKRLNALG
HHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1574003; 8905232; 9278503; 7567469 [H]